Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01515 ATGGCAATAGCATTAACACAATGCTCAGAAAAGCTAGGCTACCTCATATTTCTATTAGGCAAAAACTTTGTTATGTTTATGGCCATGGTGATTGCATGCAATGGTGTACATTTTCTTCTAAAGCCTTATCAACAACCTCGTATTACTTCCGACATACTTGTCGGACTACTTATGGGAAATGTACCGTTTTTACGTGATCTATACGGAAAATTCAACCATACATTCGGGTTTATTATTGATTTTGGCATGATGTGTTACATGTTTGCTTTGGGGGTAGAAATGGATCCTTACGTACTCTTCAAGAAACCAATTAGAGAAGCTCAAGTTGCTTATGCAGGAGTACTCATCACATTCGTCATAGCAGGTTCCGCTGCACCACTTCTCCATTACTTCGCTTCGGAAAAGTATATACTAGAATTCACTCTCTCCCTCTCGACTCTTCTTGCAAGCACGGCGTCACCCGTCCTAACCCGCCTCATAACCAGTCTCAACATAGGAAAGTCGGATATCGGGAAACTCGTCATAGCAGCAGGAATGTATTCAGATTTCATATGCTCTTTGCTTCTTTCAATCGGCTACATATCAATGCCGCTCGACACATTTTGCACCCATGCAGACCAAAAAGGACGTCTCAAAAAGGCGATCGTAATGAATAGCGCTGTTCTTGGACAGGCGTTGTTCACAGCAACAGTTTCACCAGTTTTTATGAAATGGGTTGACAATGAAAATCCTGAAGGGAAACCTATGAAAGGATCACACTTGGTGTTGTCAATTGCATTCATGGTGATAAGTTGCGCTTCATCGATACTATATAACTATAGTCCAGTTCTAAGTGCTTTTATAACAGGAATATGTTTTCCTAGGGAAGGAAGAGTTTCGAAATGGGTTATTAGCAAAATCAATTATTTGTTGACAACTATATTTTTTCCCATTTTTTTCTTGTGGATGGGTAATGCAGCTGATTTTAGGCAGTTTCAGATAAGGGATACTTGGATATGGGTAAAATTGTTTGGCCCTATTTTAATAGTAACGGTAGGTAAAGTTGCTGGAACAGTTGTTTCTGGTATAATGCTTGGATTTCATTGGCCTGAATCAGTTGCTATTGGATTGTTGCTCACCACAAAGGGACATTTTCATATCTACATGGCTATCAAAGTGATGAGTTGCGGCTCTGATGCTACATCGGGTATTGCGTTGGTGATTGCAATATTCTTCACAGTGGTGCACGCCCCTGCAGTCGTAGCACATATCATCAAACGCGCCAAGAAAAAATTGCCTATGCATCGCATGTCCCTCCAATTGCTCGATCCATCAAGTGAGCTAAGAATTCTGCTATGCCTTCATGGACCTGAGAACATTTCTGCTTCCATCAACTTCATGGAGATCTCAAGAGGGAAATCAGACCCCGGGATTCTGGTCTATGTCACGGAAATGATTGAACTAAATGATCAAATAGCAGTCACAGTAGAAAGAGGGGAAGGAGTAGAAACAACAAATGTGAAAGATAAGGATATCGTACAGATGAGAGACCAAATAACAAGCTCGTTTCAAGGTTATTTAAATGACGATGGTGGAGGCGTTACGCTCAAAAGAACGATAGCGGTGTCAACTATCAATAACATGGCACAGGATATCTGCACTTTGGCAGAGGAATTGATGATCGCTCTTATCATACTACCATTCCACAGGAGCCAAACTAGTGATGGAAAATTGGATGGTGGAAATCAAGGATTCAGATATGTGAACAGAAAGTTATTGAAGAGTGCTCCTTGTTCCGTGGGGATTCTAGTGAACAGAGGCTTAGGATCCTTCGAAAAAATATCAAAAACTCAAGTATCACTCAACGTGGCAACAGTGTTTATAGGTGGAAAAGATGATAGAGAAGCACTTGCCTATGCCGGCCGCGTAGCAGGGCATCCGGGAGTAAAACTCACAGTTATAAGATTCTTAGTAGATACCAGTGTGGAATCTTCAAGAATGGCAGCATACAGGGTAAGCCTCTCAGAGAAAGTTGAAGAGATGGGCCTAGACGATGAATGTTTTGCACAGTTTTACGATAAATATATTTCCAGTGGTAAAATTTCGTATATAGAGAAACATCTTGCTAATGCAGCTGAGACTTTCTCTACTCTCAGATCATTTGAAGGACAATACTCACTAGTTATAGTAGGAAGAGAAGGCGGACTGAACTCGATATTGACGAAGGGGATGAATGATTGGCAACAGTGTCCGGAACTAGGACCGATAGGGGATGTCCTTTCAGGACCCGACTTCTCAACAACAGTGTCTGTGTTGGTAATCCAACAACACAAACATAAAGGAGAAATAGATGGCCTTGATGAGGAATTCAACATCATGTAG 2361 0.4125 MAIALTQCSEKLGYLIFLLGKNFVMFMAMVIACNGVHFLLKPYQQPRITSDILVGLLMGNVPFLRDLYGKFNHTFGFIIDFGMMCYMFALGVEMDPYVLFKKPIREAQVAYAGVLITFVIAGSAAPLLHYFASEKYILEFTLSLSTLLASTASPVLTRLITSLNIGKSDIGKLVIAAGMYSDFICSLLLSIGYISMPLDTFCTHADQKGRLKKAIVMNSAVLGQALFTATVSPVFMKWVDNENPEGKPMKGSHLVLSIAFMVISCASSILYNYSPVLSAFITGICFPREGRVSKWVISKINYLLTTIFFPIFFLWMGNAADFRQFQIRDTWIWVKLFGPILIVTVGKVAGTVVSGIMLGFHWPESVAIGLLLTTKGHFHIYMAIKVMSCGSDATSGIALVIAIFFTVVHAPAVVAHIIKRAKKKLPMHRMSLQLLDPSSELRILLCLHGPENISASINFMEISRGKSDPGILVYVTEMIELNDQIAVTVERGEGVETTNVKDKDIVQMRDQITSSFQGYLNDDGGGVTLKRTIAVSTINNMAQDICTLAEELMIALIILPFHRSQTSDGKLDGGNQGFRYVNRKLLKSAPCSVGILVNRGLGSFEKISKTQVSLNVATVFIGGKDDREALAYAGRVAGHPGVKLTVIRFLVDTSVESSRMAAYRVSLSEKVEEMGLDDECFAQFYDKYISSGKISYIEKHLANAAETFSTLRSFEGQYSLVIVGREGGLNSILTKGMNDWQQCPELGPIGDVLSGPDFSTTVSVLVIQQHKHKGEIDGLDEEFNIM 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01515 786 FunFam Cation/H(+) antiporter 28 20 427 - -
Vivi5g01515 786 Pfam Sodium/hydrogen exchanger family 29 416 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vivi5g01515 786 PANTHER CATION/H + ANTIPORTER 27 772 - -
Vivi5g01515 786 Gene3D - 21 426 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01515 Vivi-Chr5 47259090 47262392 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g01515 24 786 Antiporter Super Family AT3G52080 48.843 0.0 783
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01515 K26731 - gmx:100815945 1143.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g01515 5 47259090 47262392 Vivi5g01515 5 47259090 47262392 ECH