Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01484 ATGAATCTCCAACCGATTTCTGTGCCTTCGATTACAGTAAATGAATTGAAGTCTGTGACAGATAGTTTTGGTACGAAGTCTTTCCTTGGTGAAGGTGCGTACGGGAAAGTATATCGCGCCATGTTGAAAATGGGACGTGAAACTGAACTCTGTTTGTCGAAATCATTTGGATTTGCGGGTATAAAGGATAAGTGTGCTGTTACGACCCAAAGGGCTTGTGGATTGAAATGGGCATGTGATGATAGGGAACTTGCTTCTGGTGGTAATGATAATCAGAAGTTAGGCTTCTTTCAGCTGCAAAACACAAGAACCTTGTTGGTCTGGTTGGATATTGTGAACAACCAGAAAGAGATGGAGCAAAAATACTAG 369 0.4173 MNLQPISVPSITVNELKSVTDSFGTKSFLGEGAYGKVYRAMLKMGRETELCLSKSFGFAGIKDKCAVTTQRACGLKWACDDRELASGGNDNQKLGFFQLQNTRTLLVWLDIVNNQKEMEQKY 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01484 122 Gene3D Phosphorylase Kinase; domain 1 2 59 - -
Vivi5g01484 122 SUPERFAMILY Pseudouridine synthase 52 97 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Vivi5g01484 122 SUPERFAMILY Protein kinase-like (PK-like) 5 45 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01484 Vivi-Chr5 44872240 44875171 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g01484 5 46 Strubbelig Receptor Gene Family AT3G14350 42.857 2.96e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01484 K13436 - vvo:131606577 250.751