Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01468 ATGATTAATCTTCTTCGCAACGATCTACTCTCACAATCGCAACCACCGATCGAATCTCTGAACCCTAGCTTGTACTTTTCCTCTTTCAACTCAGGTGATTTTTGTAATCAAGGTGTTTGTTCAAATGCCACAATGAGTTTACGTATAGCAACCTTTGGTTATAGTATTCAACTTTCTCACCTTTTATATGAGAGCTTGCGCTTAAATAGGCTTAATGGTATAGCTAAGGTTCTTGGAGTACTTGCTTCTGCTGGAGGAGCTTCAATCATTACCCTATACAAAGGACCAACAATTTATGCTCCAGAATCACCTTTAGCAGTACATCAGGGACAATTCTTGTCTCTATTTGAGGACTTCAATGGGAAAAACATGAACTTGGGTGGCATTTTTCTCTTTGGTCACTGTTTGAGTTGGTCTGGTTGGATTTTGATGCATGCATTTGTTCTGAAAAAAATTCCAGCACAACTCACTGTTTCTGCTTTTACTTGCTTATTTGGTATTGTGCAGTTTGGGACGATTGCAACATTTCTTGAGAAGGATCCCAAAGCTTGGCAGCTCAATTCCTTTGAAGAGGCCTATTGTATTTTGTACTCGGGAGTGGTGATTTCAGGAGTGGCAGCAGCAATACAAATATGGACTATTAGCAAAGGAGGGCCAGTGCTTGCTTCAATTTATCTTCCCTTACAGACATTGCTGGTAGCTTTTTCTAATATTTTTCAATTACTGCAGGGACATGTTAACCATTTGCTTAAACTTGATGGTGCAAAGGATAGGTTGCAACTCTTCAAGGCTGATTTAGTAGAAGAATGTTCTTTTGACTCTATTATTCACGACTGTCACGGGTCTTTCATATTGTTTCACTGGCTCGTTTTGTTGTTGACAACCCTCATCTTTTGTTGA 900 0.3944 MINLLRNDLLSQSQPPIESLNPSLYFSSFNSGDFCNQGVCSNATMSLRIATFGYSIQLSHLLYESLRLNRLNGIAKVLGVLASAGGASIITLYKGPTIYAPESPLAVHQGQFLSLFEDFNGKNMNLGGIFLFGHCLSWSGWILMHAFVLKKIPAQLTVSAFTCLFGIVQFGTIATFLEKDPKAWQLNSFEEAYCILYSGVVISGVAAAIQIWTISKGGPVLASIYLPLQTLLVAFSNIFQLLQGHVNHLLKLDGAKDRLQLFKADLVEECSFDSIIHDCHGSFILFHWLVLLLTTLIFC 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01468 299 Gene3D - 241 289 - -
Vivi5g01468 299 Pfam EamA-like transporter family 127 239 IPR000620 GO:0016020
Vivi5g01468 299 PANTHER WAT1-RELATED PROTEIN 45 239 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01468 Vivi-Chr5 42993680 42996910 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g01468 61 234 Nodulin-like Gene Family AT1G75500 51.124 1.28e-56 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01468 - - vvo:131658997 459.529