Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01466 ATGTGCAATGCTGATTGGATATTATGTGTGCTACCTCCAATTAGTGATAGAATAACCTTGACTACTGTTGCATTGCTAATGGATGAGATTTCGTCTTCCACAAATGTCACTCAAGATGTTGGTTCTTACTCCGATGAAAATAAAGAATCCTGGCAACATTTTGTCTTCCACGACCTTTCATCAATCAAGGATTTCTATGCTAAATACGCTCATGGAAAGGGATTTTCTTTGAGAAGAAATCTGCACTCCTTCTATGATTCTCGTAACAAAAAAACTGACATTGTGCAATATGTCCGTTATGTTTGTAACAAGCATTGTTTCAAGCATGGGAGTCGGGCGGATCCTAAGAACAAGAAAAACTCGGATACTCCTGTTTTCATTGAATTTCAAAAAGATGAAGAACTTCCCGAGGAAAGTACTGGTTGCCCAGCTAGTATTTTGTTGAAGTATGATTCCAATAGTAAAGGTTATCAGATATACAAATGGAATGTTCCTCATAACCACCCTATCCATAAACCCGAGCATTCGCATTACGCGAGATTAGCTCGAGATATTAGTGAGCCTAAAAAAAACTTGCTATAA 582 0.378 MCNADWILCVLPPISDRITLTTVALLMDEISSSTNVTQDVGSYSDENKESWQHFVFHDLSSIKDFYAKYAHGKGFSLRRNLHSFYDSRNKKTDIVQYVRYVCNKHCFKHGSRADPKNKKNSDTPVFIEFQKDEELPEESTGCPASILLKYDSNSKGYQIYKWNVPHNHPIHKPEHSHYARLARDISEPKKNLL 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01466 193 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 40 191 - -
Vivi5g01466 193 Pfam FAR1 DNA-binding domain 64 171 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01466 Vivi-Chr5 42102200 42102926 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi5g01466 FAR1 6.2e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01466 - K17604 vvo:131636111 306.99