Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01464 ATGGAAAACACCGACCATTATGATTCCAACTACTATCGATACCGTGACAGTGGAACATCTGATTCTGAATCGGAGAATGACAGTAATTCGGTGTCCAGTGCGTACCAAAGTTCAAGTGATGGCGATGGCGATGGTGATAGTCACAATGAAAAATTCCATGAATTTGATGCAGTTGTAGGTGATAGAATACTGAAAATTGATGCCCTTACTGCTGATGAAATTCGTGCTATGGAATTCGGTACAGTTGATGAAGCTAATTTGTTTTATTTCAAGTATGCTAAATGTAAAGGGTTTGCCATTAGGAAAAGTGATGTTAGGAGAAGATCGACTGGGGGTGGACAAACAATTATAATGAGGCAGTTTGTATGCAATAAACGCGGTCTAAGAGATACAAAACACTTAAGGAGGCTTGATAGAAAAAGAGAACACAGACCTACGACCCGCACTAATTGTCCCGCTAGGCTTCGTGTGCATTACAACCCCCAGAAGGGTAGTTATGTAGTGTCATGTTTTGAAGAGGCTCACAACCATGAATTAACACCATCTAGGTTTATCCACTTACACCCTATTTATCGTGAGATTACTGCAGCAGATAGAGCTCAGATTGACGGTCTACAGTCAAATGGAATTAGAACTTGTCATATAATGGGGTACATGGTTGCTCAGAAGGGTGGACACGATCGTGTTGGGTTTACAAAGAAGGATCTGTACAATTATTTTGATAGTAAAATGCGTGCTACTATTAAAGATGGTGACGTTGCCGCTGCTATAAATTATCTAAATGTGAAGTCATCTACTGATCCCATGTTATATGGTAAATATGCCGTAGGCACGGATGGACGAATGAAGTCCCTTTTTTGGGCTGATGGAAGCAGTAGATCTGACTATTTTTGTTTTGGCGATGTGATTGCGTTCGACACGACTTACAAGAAGAACAAATACAACTACCCATTGGTTATATTTTCAGGGTGTAACCACCACTCTCAGACAGTTATTTTTGGTGCTGCATTGGTGTCAGATAAAACGACAGAAACATGGAGATGGGGCGATGAGGGAATCTATAAAACAGGTGTTTCCGGATGCGACACGTCGTTTATGCGCTTGGCATTTGAACAAGAATGCGACTGA 1128 0.4113 MENTDHYDSNYYRYRDSGTSDSESENDSNSVSSAYQSSSDGDGDGDSHNEKFHEFDAVVGDRILKIDALTADEIRAMEFGTVDEANLFYFKYAKCKGFAIRKSDVRRRSTGGGQTIIMRQFVCNKRGLRDTKHLRRLDRKREHRPTTRTNCPARLRVHYNPQKGSYVVSCFEEAHNHELTPSRFIHLHPIYREITAADRAQIDGLQSNGIRTCHIMGYMVAQKGGHDRVGFTKKDLYNYFDSKMRATIKDGDVAAAINYLNVKSSTDPMLYGKYAVGTDGRMKSLFWADGSSRSDYFCFGDVIAFDTTYKKNKYNYPLVIFSGCNHHSQTVIFGAALVSDKTTETWRWGDEGIYKTGVSGCDTSFMRLAFEQECD 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01464 375 Pfam FAR1 DNA-binding domain 88 180 IPR004330 -
Vivi5g01464 375 PANTHER OS01G0519700 PROTEIN 74 348 - -
Vivi5g01464 375 MobiDBLite consensus disorder prediction 1 50 - -
Vivi5g01464 375 Pfam MULE transposase domain 302 348 IPR018289 -
Vivi5g01464 375 MobiDBLite consensus disorder prediction 23 42 - -
Vivi5g01464 375 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01464 Vivi-Chr5 42016652 42017847 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi5g01464 FAR1 3.6e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01464 - - vvo:131604575 741.11