Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01452 ATGACTTTGTTTGGCATTGGAGAAACTCTTTTGGCAATTATTCTTTTTATTGCAATCCATTATTGGAGGATTAACAAAACCACAGCCATAACAAAGTGGCCTGTGGTGGGAATGCTACCCAGTCTCTCATACAATATATCCAACTTCCATGATTATATAACCTCAGTTGTGAAACAAAATGGAGGAACTTTCATTTTTGAAGGACCTTGGTTCACAAACATGAACATTGTTTTCACTTCTGATCCCATGAATGTGAAGCACATCACAAGCACACAGTTTGAAAACTATGGGAAAGGAAAACATTTCAGAGAGATTTTCGAAACTCTTGGAGAAGGAATTTTCAGGGCTGACTCCCACATTTGGAAGTACAACAGAACCCTACTTCATTCAATTTTCAGACAGGAAAGCTTTCAGGTATTTATTCAAAAGACCATTGAGAAAAAAATTTATAGTCATCTTCTTGTGTTTCTTGATCATGCTTGTGAAAATAGGGTGCAAGTTGATTTGCAAGATGTTTTTCAAAGGTTAACTTTTGATAATATATGTTGTATAGTATTAGGGTTTGATCATAATTGTCTTTCTATTGATCTCCCTGAAATTGCATGTGAGAGAGCCTTTACTCAGTCTGAGGACACATTATTCTCTAGACATATAAAGCCAAGGTTTTTGTGGAAGCTCCAGAGATGGCTTCGAGTCGGTGAAGAGAAAAAGTTTATAGAGAATCAGAAAATTGTTGATCAAATGATTTATTCAGAAATCAAATCCATAAGAGAGACTAAAAAACAACAACAATTTGGCTTGCTAGATATGCTTATGAATGAAGTGAGAGATGGAGAAAATCTAATAGATGACAAGTTTCTAAGAGACACAACAATTAACCTTCTTGCAGCTGGAAGAGACACTATTAGTTCTGGCCTTACTTGGTTTTTCTGGTTGGTAGCAACACACCCTATTGTTGAAGCTAAGATTCTTGAAGAGATCAAAGAAAAACTATCATCAAAGAAAGATTTAGGAGTGGAAGGGCTTAGCAAGTTGGTTTATCTACATGGAGCATTATGTGAAACCCTAAGGCTATATCCGCCGGTGCCGTTTGAGCATAAGTCTCCATTGAAACATGATGTGCTTCCTAGTGGACATAAGGTTAAGGCAAATGCAATGATAGTGTATTCTCTATACTCAATTGGAAGGGTGGAGGAAATATGGGGAAAAGATTGCTTGGAGTTTAAGCCAGAGAGATGGATTTCTAACAAAGGAGGGATAATTCATGTGCCTTCTTACAAGTTCATTGCTTTCAATGCTGGACCAAGGAGTTGTTTGGGTAAGCATATAAGTTTCATTGAGATGAAAATGGTGGCTGCTGCAATATTGATGGATTATCATGTTCATGTGGTGGAGGATCATCCTGTAATCCCAAGTGTTTCTGTTGTTCTACATATGAAACATGGCTTGAAAGTTAATATTAAGAAGAGATCCATTTGA 1479 0.3678 MTLFGIGETLLAIILFIAIHYWRINKTTAITKWPVVGMLPSLSYNISNFHDYITSVVKQNGGTFIFEGPWFTNMNIVFTSDPMNVKHITSTQFENYGKGKHFREIFETLGEGIFRADSHIWKYNRTLLHSIFRQESFQVFIQKTIEKKIYSHLLVFLDHACENRVQVDLQDVFQRLTFDNICCIVLGFDHNCLSIDLPEIACERAFTQSEDTLFSRHIKPRFLWKLQRWLRVGEEKKFIENQKIVDQMIYSEIKSIRETKKQQQFGLLDMLMNEVRDGENLIDDKFLRDTTINLLAAGRDTISSGLTWFFWLVATHPIVEAKILEEIKEKLSSKKDLGVEGLSKLVYLHGALCETLRLYPPVPFEHKSPLKHDVLPSGHKVKANAMIVYSLYSIGRVEEIWGKDCLEFKPERWISNKGGIIHVPSYKFIAFNAGPRSCLGKHISFIEMKMVAAAILMDYHVHVVEDHPVIPSVSVVLHMKHGLKVNIKKRSI 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01452 492 Gene3D Cytochrome P450 15 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01452 492 Pfam Cytochrome P450 32 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01452 492 SUPERFAMILY Cytochrome P450 32 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01452 492 CDD CYP86A 64 483 - -
Vivi5g01452 492 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Vivi5g01452 492 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01452 492 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01452 492 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01452 492 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01452 492 PANTHER CYTOCHROME P450 22 485 - -
Vivi5g01452 492 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01452 492 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01452 492 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01452 492 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01452 Vivi-Chr5 41457482 41459090 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g01452 1 491 Cytochrome P450 AT2G23180 43.860 2.83e-157 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01452 - - tpra:123890719 783.867