Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01428 ATGATGTTGTTTCAAACACACAACAACATCGTCATCATGTTTATGATCATGTTCTTCATCATAAACACAATCTTAGTAACATCATCATCACCATCAATTCTCCGACCTGGGTTTTACTCAAAAACATGTCCAAAAGCTGAAACTATTGTCAGAGATGTCATGAAAAAAGCACTTCATAAGGAACCAAGAAGTGTTGCTTCTGTTATGCGCTTTCAATTTCATGATTGCTTTGTTAATGGGTGTGATGCTTCTATGTTGCTTGATGATACACCAACGATGCTTGGAGAGAAATTGGCCCTTTCTAATATAAATTCTCTTAGATCATTTGAGGTTGTTGATGAGGTTAAAGAGGCTCTTGAGAAGGCTTGTCCTGGAGTTGTTTCTTGTGCTGATATCATTATCATGGCTTCTAGAGATGCTGTAGCTCTGACAGGAGGACCTGATTGGGAAGTGAAGTTAGGAAGATTGGACAGTTTAACAGCAAGTCAAGAAGACTCAAACAATATCATGCCAAGTCCGAGAGCCAATGCGACTGCTCTCATTACCCTCTTCGAAAAATACAATCTTTCTGTCAAAGATCTTGTAGCGCTATCAGGATCTCACTCTATCGGTCAAGGTCGTTGTTTTTCGATTATGTTTAGGCTGTACAATCAATCGGGAAGTGGTAAACCCGACCCTGCAATTGATCCTCGCTTCAGAGCCGAGCTTAACAAGCTATGTCCACTTGATGTTGATCAAAACAAGACAGGAAACCTTGATGCAACTCCTGTGATTTTCGATAACCAGTATTTCAAGGACTTGGTTGGCGGAAGAGGGTTTCTGAACTCGGATCAAACACTTTACACATTTCCTCAGACGCGGGGTTTTGTGAAGCTTTATAGTAAAGATCAGAGTAAGTTTTTCAAAGCGTTTGCGGAAGGGATGGTGAAAATGGGTGACTTGCAGTCCGGTCGACCGGGCGAGGTCAGGAAGAATTGCAGAGTCGCCAATCCTCGTCCTGAGCATTTCCTGATTGAAAACAACTTGCAGGACAGTGATCTACCAATGTAA 1050 0.4171 MMLFQTHNNIVIMFMIMFFIINTILVTSSSPSILRPGFYSKTCPKAETIVRDVMKKALHKEPRSVASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLALSNINSLRSFEVVDEVKEALEKACPGVVSCADIIIMASRDAVALTGGPDWEVKLGRLDSLTASQEDSNNIMPSPRANATALITLFEKYNLSVKDLVALSGSHSIGQGRCFSIMFRLYNQSGSGKPDPAIDPRFRAELNKLCPLDVDQNKTGNLDATPVIFDNQYFKDLVGGRGFLNSDQTLYTFPQTRGFVKLYSKDQSKFFKAFAEGMVKMGDLQSGRPGEVRKNCRVANPRPEHFLIENNLQDSDLPM 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01428 349 PRINTS Plant peroxidase signature 67 87 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi5g01428 349 PRINTS Plant peroxidase signature 126 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi5g01428 349 PRINTS Plant peroxidase signature 107 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi5g01428 349 PRINTS Plant peroxidase signature 145 160 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi5g01428 349 PRINTS Plant peroxidase signature 43 62 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi5g01428 349 PRINTS Plant peroxidase signature 192 204 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi5g01428 349 PRINTS Plant peroxidase signature 250 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi5g01428 349 PRINTS Plant peroxidase signature 266 283 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi5g01428 349 PRINTS Plant peroxidase signature 306 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi5g01428 349 FunFam Peroxidase 37 180 - -
Vivi5g01428 349 Gene3D Peroxidase, domain 2 171 311 - -
Vivi5g01428 349 PRINTS Haem peroxidase superfamily signature 127 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi5g01428 349 PRINTS Haem peroxidase superfamily signature 145 157 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi5g01428 349 PRINTS Haem peroxidase superfamily signature 252 267 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi5g01428 349 PRINTS Haem peroxidase superfamily signature 65 79 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi5g01428 349 PRINTS Haem peroxidase superfamily signature 193 208 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi5g01428 349 Gene3D - 37 330 - -
Vivi5g01428 349 SUPERFAMILY Heme-dependent peroxidases 34 331 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vivi5g01428 349 ProSitePatterns Peroxidases proximal heme-ligand signature. 193 203 IPR019793 -
Vivi5g01428 349 ProSiteProfiles Plant heme peroxidase family profile. 33 330 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi5g01428 349 PANTHER PEROXIDASE 72-RELATED 30 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi5g01428 349 CDD secretory_peroxidase 34 328 IPR033905 GO:0004601|GO:0042744
Vivi5g01428 349 FunFam Peroxidase 171 311 - -
Vivi5g01428 349 Pfam Peroxidase 50 296 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01428 Vivi-Chr5 40656607 40658128 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g01428 15 338 Peroxidase AT2G22420 75.926 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01428 K00430 - gmx:100796737 535.028