Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01425 ATGTCGCTCAACATGAAAACCCTAACCCAAGCTCTAGCAAAAACCGCAGCAGTAATCGAGAAAAGGGTGCAAACAACGGTGCAGGAGGTAACCGGTCCGAAGCCACTTCAGGACTACGAGCTTCTCGATCAGATCGGTTCGGCCGGACCGGGTTTAGCCTGGCGACTTTATTCGGCCCGGGCTCGGGATCCGTCGCGGCAGCATCAGTATCCTGTTGTGTGCGTTTGGGTGTTGGATAAACGGAGTTTGTCGGAGGCGAGAATGCGGGCGGGGTTGACGAAAGCGGCGGAGGATTCGTTTTTGGATTTGATTCGGACGGATGCGGGGAAGCTTGTTAGGCTTAGGCATCCTGGAGTTGTGCATGTTGTTCAGGGACTTGATGAGAGTAAGAACGCGATGGCGATGGTCACGGAGCCGTTGTTTGCTTCTGTTGCGAATACGCTTGGGTGTCTTGATAATGTTGCTAATGTTCCTAAGGATCTTAGGGGAATGGAAATGGGATTGTTGGAGGTGAAGCATGGTTTACTTCAGTTGGCGGAATCGTTGGATTTTCTTCACAATCAGGCTCATCTTATTCATAGAGCTATATCACCTGAGAATGTTTTTATCACATTGAGCGGAGCCTGGAAACTTGGTGGATTTGGTTTTGCAATTCCTGCTTCGCAGAACCATGGCGAGTTATCTAATCAGCAAGCCTTCCATTATGCTGAATATGACGTTGAAGACTCTATTTTGCCACTTCAGCCATCGATCAATTACACTGCTCCCGAGATGGTGAGGAGCACTGCTTCTTCAGCTGGGTGCTATTCTGATATTTTCAGTTTTGGATGCCTTGCCTACCATTTGATTGCTCGCAAGCCTTTGTTTGACTGCCACAACAATGTGAAGATGTACATGAATACCTTGACTTACTTATCCAGTGATGCTTTCTCATCTATCCCATCGGAACTGGTTCCTGACTTGCAAAGGATGCTCTCTTCAAATGAATCTTACAGGCCAAGTGCGATGGATTTCACAGGCTCACAGTTTTTTCGGAATGACACTAGGTTACGTGCTCTGCGCTTCTTGGACCACATGCTTGAAAGAGATAACATGCAGAAGTCAGAGTTCTTAAAAGCCTTGTCAGATATGTGGAAAGATTTTGATTCCCGTGTATTGCGATACAAGGTCCTTCCACCACTTTGTGCAGAACTTAGGAATGTAGTGATACAGCCAATGATTCTACCAATGGTTCTGACCATTGCAGAGTCTCAGGACAAGAATGATTTTGAGCAATCAACACTTCCAGCCCTTGTCCCTGTCTTAAGCACTGCTTCTGGTGACACAATGCTACTGCTTCTGAAGCATGCTGATCTAATAATAAACAAGACTACTCAAGAACATTTAATTTCACATGTTCTTCCAATGATTGTTCGGGCCTATGATGATAATGATGCACGTTTACAAGAAGAGGTCCTGAAAAAGACTGTATCCCTCGCCAAACAACTTGATCCCCAGCTGGTGAAACAAGTGATTTTACCCCGTGTTCATGGACTAGCACTCAAAACAACGGTTGCCGCGGTTAGAGTCAACGCTTTGCTGTGCCTAGGAGAAATGGTTAACCGACTTGATAAAAATGCTGTCCTGGAAATCTTGCAAACTATTCAGCGCTGTACTGCTGTTGACCATTCTCCTCCAACCCTTATGTGTACCCTTGGGGTTGCAAATTCTATTTTTAAGCAGTATGGAGTAGAATATGTTGCTGAACATGTTCTTCCATTGCTTATGCCACTCCTGACTGCTCAACAACTCAATGTTCAACAGTTTGCCAAATATATGCTTTTTGTCAAGAATATACTCCAGAAGATAGAAGAGAAGCGGGGAGTTGTTGTGACTGATTCTGGACTCCCAGAGGTAAAATTATCTCCTACAGTGAATGGCCTTCAGGTTGATGCTTCGAGGACAATGAACAGCACTATTGCTACTCCAACGAAAAGCAGCTCCTCTTGGGATGCAGATTGGGGTCCTAAAACAGCGAGAGCCGCCAATTATGTTACGAATCCTACTAATACATCTAGTCAGCCAGTGATAGGAAACCCTGTGGGTCAAGTAGCATCTTTACAAAATCCTTTGTCCTTATCTGGTGTATCTAATCAACAGACAGCCAAATCATGTCCTTCAGTAGATATAGAGTGGCCGCCCCGTGCATCTTCAGGAGTTACCTCACAATTTGGTGATACCGAAAGGCAAACAGTTGCAGCAGGAACCTCATCCACATCTAATCATGAAGATGATGATCCTTTTGCCGACTGGCCTCCGCGCACTAGTGGCCCATTATCTGGTGGATTTGGAAATTCCAACAATGGTACTTCAGGAATGCCACTAAACAAATTAGGGCATAATTCAATGACAAGCAATTCAAGCAATCTTCAAGCCAGCAACAATTGGTCTGTCAACCCCCAAAGTTCCCTGGAGTCTATCAGTTTGAACACAAGGAATGCTAGTTCATCTATTAGTAACCCGAATAATGGCTTTCAACCTCAGAGTCCTATTGGGCTCCTAAAACAAAGCCAGGCCTTTCCAGCATCGAATGTTGTTTCGTCATCATATAATAACGTTAAATCTACCGATCTTGGATCAATATTTTCTTCCAACAAGAATGAACAAATTGCACCTAGACTTGCCCCACCCCCTTCAACCACAGTGGGTAGAGGGCGGGGAAGAGGGAGGGGTGCTACTTCAACCAAACAGCCCTCTCATACAAAGTCAAGCACTGAACAGCCACACCTTTTGGATTTGTTGGGGTAA 2787 0.4525 MSLNMKTLTQALAKTAAVIEKRVQTTVQEVTGPKPLQDYELLDQIGSAGPGLAWRLYSARARDPSRQHQYPVVCVWVLDKRSLSEARMRAGLTKAAEDSFLDLIRTDAGKLVRLRHPGVVHVVQGLDESKNAMAMVTEPLFASVANTLGCLDNVANVPKDLRGMEMGLLEVKHGLLQLAESLDFLHNQAHLIHRAISPENVFITLSGAWKLGGFGFAIPASQNHGELSNQQAFHYAEYDVEDSILPLQPSINYTAPEMVRSTASSAGCYSDIFSFGCLAYHLIARKPLFDCHNNVKMYMNTLTYLSSDAFSSIPSELVPDLQRMLSSNESYRPSAMDFTGSQFFRNDTRLRALRFLDHMLERDNMQKSEFLKALSDMWKDFDSRVLRYKVLPPLCAELRNVVIQPMILPMVLTIAESQDKNDFEQSTLPALVPVLSTASGDTMLLLLKHADLIINKTTQEHLISHVLPMIVRAYDDNDARLQEEVLKKTVSLAKQLDPQLVKQVILPRVHGLALKTTVAAVRVNALLCLGEMVNRLDKNAVLEILQTIQRCTAVDHSPPTLMCTLGVANSIFKQYGVEYVAEHVLPLLMPLLTAQQLNVQQFAKYMLFVKNILQKIEEKRGVVVTDSGLPEVKLSPTVNGLQVDASRTMNSTIATPTKSSSSWDADWGPKTARAANYVTNPTNTSSQPVIGNPVGQVASLQNPLSLSGVSNQQTAKSCPSVDIEWPPRASSGVTSQFGDTERQTVAAGTSSTSNHEDDDPFADWPPRTSGPLSGGFGNSNNGTSGMPLNKLGHNSMTSNSSNLQASNNWSVNPQSSLESISLNTRNASSSISNPNNGFQPQSPIGLLKQSQAFPASNVVSSSYNNVKSTDLGSIFSSNKNEQIAPRLAPPPSTTVGRGRGRGRGATSTKQPSHTKSSTEQPHLLDLLG 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01425 928 SMART serkin_6 39 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g01425 928 ProSiteProfiles HEAT repeat profile. 466 503 IPR021133 -
Vivi5g01425 928 MobiDBLite consensus disorder prediction 729 755 - -
Vivi5g01425 928 MobiDBLite consensus disorder prediction 825 844 - -
Vivi5g01425 928 MobiDBLite consensus disorder prediction 877 928 - -
Vivi5g01425 928 MobiDBLite consensus disorder prediction 905 921 - -
Vivi5g01425 928 PANTHER SCY1-RELATED S/T PROTEIN KINASE-LIKE 36 916 - -
Vivi5g01425 928 Gene3D - 348 621 IPR011989 -
Vivi5g01425 928 CDD PK_SCY1_like 45 346 - -
Vivi5g01425 928 Pfam Protein kinase domain 108 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g01425 928 Gene3D Transferase(Phosphotransferase) domain 1 159 347 - -
Vivi5g01425 928 MobiDBLite consensus disorder prediction 708 813 - -
Vivi5g01425 928 ProSiteProfiles Protein kinase domain profile. 39 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g01425 928 SUPERFAMILY Protein kinase-like (PK-like) 34 348 IPR011009 -
Vivi5g01425 928 MobiDBLite consensus disorder prediction 772 813 - -
Vivi5g01425 928 SUPERFAMILY ARM repeat 312 608 IPR016024 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g01425 92 335 AGC Kinase Gene Family AT3G10540 23.077 3.13e-09 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK SCY1_SCYL2 Vivi5g01425 Pkinase 5.6e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01425 K17541 - gmx:100796211 1465.67