Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01359 ATGGATGCCACTCACACCATGTTTTGTAACAATGATCTTGTTAACCCTCTTAGCTCAATGGGCATGCAAGTTTCATGCATTCTTGTTGTATCACATTTCTTCAATGTCCTCCTTAGAAGTTTGGGTCAACCTGGTCCTATTGCACAGATTCTGGCTGGGTTGATATTAGGACCAATGTCACATATACCATATATAAGAAAAACGTTCTTCCCACCAAGTTCAATAAACTACTACGAAATTGTGGGCTTCTTCTGTCGCATACATTTCATGTTCTTATTTGGTTTAGAGACAAACCTTCAATACATGTTGCGCAATCTACGTTTGGTTACATTGGTAGCATGTGGTGGTTCCCTACTTGGTGCAATTTTTGGTCTATCAGTCTCATTTTATTTGTATCAAAATCTAAATTTGAATCTCAACATTTATTATTTCTGCATGGTCATCATGTTAATGGTATCATACACAAGCTCCCCGATGGTGATCCGTTTATCGACCGAGTTACGTTTTGCAGCGTCTAATATCGGGCGAATCGTAGTGTCCTCAGCGTTGATAATCGAAATTGCCTGCTTGGTGTTCTTTGATGTGGTGATTTGTTGGCAAAAAAGAAACCACATTTCCAATGGTTTTCTGTGTACTATCACTATATCTTTTGTGATTCTGACTAACAAATACTTAGCCGTATGGCTAAACTCGAGAAACCGATACCAAAAATACCTAAAAGCTCCTGAGTTATTACTCATACTTTTTCTTCTTCTAACAAGCTCAATGCTTATAGAAATTTTGGGTTACAATAGTATTATTAGTTGTTTTATAATTGGATTGGTGTTTCCTAAAGAAGGAAAAACAGCTAGGACATTGATATATAAACTTGGTTATTCAATTTACAATTTTGTTCTTCCTATATATTTTGGGTATATGGGTTTACAATGTGACCTCATACAAGTGTTCCGAAGCCTGAATAAAACAACAGATACAGCAATATTGATTTTGTTGTGCATTGGTAGCAAACTTGGTGGCACACTTTTGGTTTGTCGATACCTTAATATTCCTACAAGTGACGGGATTTTCATTGGCTTCATATTGAATACCAGAGGTTATGCTGATTTGTTGTTCATTGCTGCTATAGCAAAACATGCAGTTGATCTTGACTTAGATGCTTACAATATGTTGATAGTATCGATAGTATTGAACACGGTCATATCAGGATTAGTTGTGGCTTTTCTAGCAAAAGGGGAAGCGAAAATGTTTTCGAACAACCATACTACAATTGAGCCTCAACAAATGGAAGACGAGCTTCGAATTTTGGCTTGTGTATATGATCCTCGACAGGTATCTGCCGTACTCGCCACAATACTAGCAATCCATGGCTCAAGAGCATCACCTTCCACGACTTATTTAATGCATTTGATAGAGCTTGTGAAGAAAATCAAGTCCAATTTGTTATACCATGAAAAAGAAAACGGAAGCCTCAGCGATGACGAAGAAGCCTACGGTGGAAATGATGTGGTGGACATTAATAATGCCTTAGATGCATTCACTTTAGATACAAAGATTTTGATTCACCAAAAAAAGACTGTATCTTCTTTCCCAAGTATGTATGAAGATGTTTGCAATGAAGCGGAAGATCTTAAAGTGACAATAATTCTTATCCCTTTTCACAAACACGAGCGCATTGATGGAAAACTTGAAAGCGGTAAAGAAAGTATAGTAGTTACTAATCAGAAGATTCTCAGGCACGCGCCTTGTTCCGTCGGTGTGATCATTGAAAGAGGACTTACAAAGACATTTGGTTTCTCTGAGCTAATTGAATCCGAAGCCACGCAAAATGTTGCAACACTTTTCTTTGGAGGTCCAGATGACCGCGAGGCGATTGCTTGGAGCCTAAGAATCTCCAAATGCCCTCATATCAACTTGACTATTATTAGATTTTTGCCGGCTTCATCACAAAATGAAAAAATTAAAGAAAACGGAGTACAGTACGACGGAAAGGAAATTCTAATGTCCTTGTCGGGGGAAGAGAGTGAGAACGACGAGATTGACAATACGTTTATGGTCGATTTCTATAACCGACATGTGACCTTAGGACAAATTGGATATGTGGAGAATTTTGTGAAGGATGGAAAGCAAACATTGGAATGTTTGAAGGAGGTTGGAGACATGTACTCTTTGTTTGTGGTTGGAAAAGGTGGTAGAAGAAATAATTCATTGACAATAGGTATGAGTGATTGGGAGGAATGTCCTGAACTTGGAACAGTTGGTGATGTGTTGGCTTCTTCAGATTTTGATATTCATGGATCTGTTTTGGTCATTCAACAACATAGAGATGCTAAGAAAGGTTTAATACATTATTAG 2352 0.378 MDATHTMFCNNDLVNPLSSMGMQVSCILVVSHFFNVLLRSLGQPGPIAQILAGLILGPMSHIPYIRKTFFPPSSINYYEIVGFFCRIHFMFLFGLETNLQYMLRNLRLVTLVACGGSLLGAIFGLSVSFYLYQNLNLNLNIYYFCMVIMLMVSYTSSPMVIRLSTELRFAASNIGRIVVSSALIIEIACLVFFDVVICWQKRNHISNGFLCTITISFVILTNKYLAVWLNSRNRYQKYLKAPELLLILFLLLTSSMLIEILGYNSIISCFIIGLVFPKEGKTARTLIYKLGYSIYNFVLPIYFGYMGLQCDLIQVFRSLNKTTDTAILILLCIGSKLGGTLLVCRYLNIPTSDGIFIGFILNTRGYADLLFIAAIAKHAVDLDLDAYNMLIVSIVLNTVISGLVVAFLAKGEAKMFSNNHTTIEPQQMEDELRILACVYDPRQVSAVLATILAIHGSRASPSTTYLMHLIELVKKIKSNLLYHEKENGSLSDDEEAYGGNDVVDINNALDAFTLDTKILIHQKKTVSSFPSMYEDVCNEAEDLKVTIILIPFHKHERIDGKLESGKESIVVTNQKILRHAPCSVGVIIERGLTKTFGFSELIESEATQNVATLFFGGPDDREAIAWSLRISKCPHINLTIIRFLPASSQNEKIKENGVQYDGKEILMSLSGEESENDEIDNTFMVDFYNRHVTLGQIGYVENFVKDGKQTLECLKEVGDMYSLFVVGKGGRRNNSLTIGMSDWEECPELGTVGDVLASSDFDIHGSVLVIQQHRDAKKGLIHY 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01359 783 Gene3D - 19 416 IPR038770 -
Vivi5g01359 783 PANTHER CATION/H + ANTIPORTER 10 774 - -
Vivi5g01359 783 Pfam Sodium/hydrogen exchanger family 27 410 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01359 Vivi-Chr5 38167754 38170896 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g01359 7 776 Antiporter Super Family AT1G16380 38.520 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01359 K26731 - gmx:100804522 1211.44