Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01321 ATGAGGAATAACAAGTTCAAGCTTTCAAATATGATTCCCAATGCTTGGTTTTACAAGCTAAAGGAAATAGGCAAACCAAAAAACCAAACAACCTCAAAGAACAACAAAAAAACCTCAAAAACATCCTCAATTTCCTCAAAACCAAATCCACCCAACCAAAACCAAAACCAATACATTCCTAGAAAATCTTACTACTTCACAAGAAACCTTAACCAAAACAAATTACCCTCTTCTTCATCACCAAAAACACCCTCCAAAAACAGAACAAGAAAAACATGTTCTTCTTCACCAAAACATCTTACCTCCTCTGTCTCCGCGGATTGTAGCTGTCGAACCACACTCGAATCCGTGTGGACGAAATCCGAAACACTTTCTTCGTCCCCGTTATATGAGTCAGAATCCGTTGACACCGAGTTCAGAACAGACAGGGTTCTACTTCCCAATGAAACATCATTTGATGAAATGGTTTCTTTGTCCATTTCTTCTTGTCCTTGCACCAACAAAACATCCTCAAACAATAACAATATCAACAACAACAACAACGTAGATATTGTTATCGATGTTGACAAGAATTCCCTACCTAGAAAAGATGATAAACTTGAACAAGACTACAATTCTTATGTTTCTTTCTCAAACCTACAACTTCCTCCCATCATCACAAAACCACAAATCAAAAAACAACACAACCCCGAAAAACATCATCAACCACAACAACAAGAAACAATGAAGAACAAGAACACCACGAACAAGAACAAGAACAGGAACAAACACAAGACAGGCTCTATAAATTCTCCGGGGATGAAGCTACGGATAAAATCTCCGAAAATTGCAACAAAGAAACTTCAATTATATCACAGCCGGAAAAGCGTGTCGTCTGCTACAACGACAGCTTCCGGCGGGTACTACCGGAGAAGAAGCTTCTCTGGTAGTGTGGCAATAGTGAAGTCATCTTTTAATCCTCAGAAGGATTTCAGAGAGTCAATGGTGGAGATGATTGTGGAGAATAACATAAGAGAATCAAAGGATTTGGAAGATCTTCTTGCTTGTTATCTTTCTTTGAATTCAGATGAGTATCATCAGCTTATTATCAAGGTGTTCAAGCAAATATGGTTTGATTTGACTGAAAACAGGGTAGACAAATATAACTAG 1149 0.3803 MRNNKFKLSNMIPNAWFYKLKEIGKPKNQTTSKNNKKTSKTSSISSKPNPPNQNQNQYIPRKSYYFTRNLNQNKLPSSSSPKTPSKNRTRKTCSSSPKHLTSSVSADCSCRTTLESVWTKSETLSSSPLYESESVDTEFRTDRVLLPNETSFDEMVSLSISSCPCTNKTSSNNNNINNNNNVDIVIDVDKNSLPRKDDKLEQDYNSYVSFSNLQLPPIITKPQIKKQHNPEKHHQPQQQETMKNKNTTNKNKNRNKHKTGSINSPGMKLRIKSPKIATKKLQLYHSRKSVSSATTTASGGYYRRRSFSGSVAIVKSSFNPQKDFRESMVEMIVENNIRESKDLEDLLACYLSLNSDEYHQLIIKVFKQIWFDLTENRVDKYN 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01321 382 Pfam DNA-binding domain 1 42 IPR025830 GO:0003677
Vivi5g01321 382 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 43 375 IPR038933 GO:0045892
Vivi5g01321 382 MobiDBLite consensus disorder prediction 71 103 - -
Vivi5g01321 382 ProSiteProfiles OVATE domain profile. 313 372 IPR006458 -
Vivi5g01321 382 Pfam Transcriptional repressor, ovate 317 373 IPR006458 -
Vivi5g01321 382 MobiDBLite consensus disorder prediction 26 58 - -
Vivi5g01321 382 MobiDBLite consensus disorder prediction 224 267 - -
Vivi5g01321 382 MobiDBLite consensus disorder prediction 225 239 - -
Vivi5g01321 382 NCBIfam uncharacterized plant-specific domain TIGR01568 311 374 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01321 Vivi-Chr5 36458451 36459841 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vivi5g01321 Ovate 1.8e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01321 - - cam:101506553 349.747