Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01319 ATGTTTAAGGGAAGAATAGGAGGCAAAGCTCAACTTGGATATGTAGAAACTGATCCTTCAGGTCGATATGGACGTTTTAGGGATGTCCTTGGCAAAGGAGCTATGAAGATAGTTTATAAAGCATTTGATGAAATCTTAGGACTTGAAGTGGCTTGGAACCAAATCAAACTTGATGATGTTTTTCAATCACCGGATCAACTTCAACGTCTCTATTCAGAAGTTCATCTTCTAAAGAACTTGGATCATGATTCTATCATTACCTTCCATGGTACTTGGATTGATGTTGATCGTAGAACATTCAATTTCATCACTGAATTGTTCACTTCCGGAACCCTAAGAGAGTATAGAAAGAAGTACCCTCGTGTAGATATCAGAGCAATAAAGAATTGGGCTCGTCAAATTTTAAATGGTTTGGTGTATTTGCATAGCCATGATCCACCTGTAATACATAGAGACCTAAAATGTGACAATATCTTTGTCAATGGTCATATGGGAAAGGTCAAGATTGGTGATTTAGGCCTTGCAGCAATTCTTCGTGGCTCCCAACATGCACACAGTGTCATAGGTACACCTGAATTCATGGCACCAGAATTGTATGAAGAGGAATACAATGAGTTGGTAGACATATACTCATTTGGCATGTGCATGATTGAGTTGTTCACTTCAGAGTTTCCATATAGTGAATGCACTAACCCTGCTCAAATATACAAAAAAGTTACCTCAGGGAAGCTACCAGAGGCATATTACAAGATTCAAGATAAAGAAGCCCAAGAGTTTGTTGGGAAGTGTTTGGCAAATGTATCAAAGAGATTGTCAGCAAAAGAGCTTTTGTTGGACCCATTTTTAGCCACAGCCCAACATGAGTCACCATTGCTTAGTCCAACTTCACCTCAAAAAAACAATTTCAATGCAATAATTGCCAAAGAGGAACTTTCATTGAATGATCAAAGAAAGAGCACTTTCATGACAATCACAGGAAGTATGAATGAAGAGGATGATACTGTTTTCCTTAAAGTCAAAATTTCTAACAAAGAAGGGAACACAAGAAACATATATTTTCCATTTGACACCATAAAGGACACTGCAATTGAAGTTGCAAATGAAATGGTGAAAGAACTAGAAATTAGTGACTTGGAACCATTGGAGATTGCTGAGATGATTGAAGAAGAGATTTCAACTATAGTTCCAACATGGAGGGATTGTGACACTTCTAAGTATGAAAAACAACATAGTTTTAACTATGGTGAAGATGATGATAATGATCACCATCCTTTCTTCTCGCCGCCTTCTCGATCTTCTTCGCATGGTTCCCTCCCTATGTTTTGTGCTTCATTCAACAATAATGGAAACCTTTGTGGGAGTCATTATTCTCTTGCTCAAGATTGGTTACAAGATGATCATCAATTTATTAATGATGATGCAAGCTCACAAACCTCAATGAACTCCATCAAGTGTTTCAATTTCCATTGCGACGATTCATGCAACGAAGACGAACACGATTCAACTCTTCAAGTAGGAGAAGAATCCTTTTGTTGCAATCCAAAGAGTAACAACAAATGGACAAGATTTTGTCCTCCAAAAGATATGGTGGAAGCTGGTTTCACCAAAATGTTTTGCAACATGAAAATGAATTCTCACACTCAAAATCACAATCATAGGAATCATCATGGAACAAGGAATGGATGTAAGAGACTAACAAGGATTAATTCATGTGTTGATGTGAGGAGACAACAATTGCAAAGATCTTTGATGGAAGAGATGGAAAAGAGAAGGGTGTTCAACACGGTTAATGCTATTGAGAATGTTGGGTTTCAAAATCCAGAAGGAGATGGATGTTTTTGTTGA 1845 0.3756 MFKGRIGGKAQLGYVETDPSGRYGRFRDVLGKGAMKIVYKAFDEILGLEVAWNQIKLDDVFQSPDQLQRLYSEVHLLKNLDHDSIITFHGTWIDVDRRTFNFITELFTSGTLREYRKKYPRVDIRAIKNWARQILNGLVYLHSHDPPVIHRDLKCDNIFVNGHMGKVKIGDLGLAAILRGSQHAHSVIGTPEFMAPELYEEEYNELVDIYSFGMCMIELFTSEFPYSECTNPAQIYKKVTSGKLPEAYYKIQDKEAQEFVGKCLANVSKRLSAKELLLDPFLATAQHESPLLSPTSPQKNNFNAIIAKEELSLNDQRKSTFMTITGSMNEEDDTVFLKVKISNKEGNTRNIYFPFDTIKDTAIEVANEMVKELEISDLEPLEIAEMIEEEISTIVPTWRDCDTSKYEKQHSFNYGEDDDNDHHPFFSPPSRSSSHGSLPMFCASFNNNGNLCGSHYSLAQDWLQDDHQFINDDASSQTSMNSIKCFNFHCDDSCNEDEHDSTLQVGEESFCCNPKSNNKWTRFCPPKDMVEAGFTKMFCNMKMNSHTQNHNHRNHHGTRNGCKRLTRINSCVDVRRQQLQRSLMEEMEKRRVFNTVNAIENVGFQNPEGDGCFC 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01319 614 SMART serkin_6 24 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g01319 614 SUPERFAMILY Protein kinase-like (PK-like) 26 283 IPR011009 -
Vivi5g01319 614 Gene3D - 327 400 - -
Vivi5g01319 614 Gene3D Transferase(Phosphotransferase) domain 1 107 288 - -
Vivi5g01319 614 ProSiteProfiles Protein kinase domain profile. 24 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g01319 614 Gene3D Phosphorylase Kinase; domain 1 9 105 - -
Vivi5g01319 614 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 13 541 - -
Vivi5g01319 614 FunFam probable serine/threonine-protein kinase WNK9 107 287 - -
Vivi5g01319 614 Pfam Protein kinase domain 28 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g01319 614 FunFam Probable serine/threonine-protein kinase WNK1 9 105 - -
Vivi5g01319 614 CDD STKc_WNK 22 282 - -
Vivi5g01319 614 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01319 Vivi-Chr5 36254983 36261988 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g01319 12 420 MAP Kinase Kinase Kinase AT3G51630 69.082 0.0 594
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Vivi5g01319 Pkinase 7.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01319 K08867 - gmx:100816187 890.952