Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01295 ATGGGATGTTTAACTGTCATCAAGAACATGAAGAAAAAGTATGAAAGGTCGAAATCACAAATCGGAAGTCGTAATGAGAAGGTATCTACAGCAATGCCTCAACTTCAAGCTTCTCGCTCATTACACTTCGATCCTCAAAATCCTAAGACTAGCGTGAAATCGCCTAACCCGATTAACCAAGTTACCAACAACCGAACAAGAACATTATCTGCTCCATCAGCTCTTCAAGATGCAGAGGCTCTAGCCTCAGTTGAGCAAGAGGAAGGAGAAATGTCGAAATCTCTAGCGAGATTAATGAAGGTGGCTCCTTTACCTAGTCCAGTACCTAGTCCACTACCCTTACCTCTTCCATCTCCTCGAAATAGGGGTCCGTTGAAGTTAAGGATGGCTAGTGATCCTTTCTATGCTTCTGGCTCGGGTAATGATACAGCAGAACAAGATGGTGTTGAAACATTTCAGTGTGATGCGCGAGAATGGTATAAAAACCGAGACAGATCCATGAAGAAAATGCATCTAGCTAGGCCACTACCTTTACCGCCTAAAGGAAGATATCCATTGAAGGCTACTAGCAGCCCTAAGCCAGAAACAGTTATTGATCCGGTTCGTTTCTTTCTGTATGAGGAAATTGTCGCTGCTTGTCACAATTTCCGTTGGGATAGATGCATGGCAGAATGTTTTTCTTCCACCATATATAAAGCTTCCTTTTTTCATGAAGCTTCATGTAAGAAGCTTAAAGCCACTGTCACGCGCCTTCACCCATCAACTCAGGGCTTGAGGGAGTTCATGAATGAAGTTAGTTCTCTTGCGAAAATACAACATCCGAACATCTGCAAATTGCTCGGATTTTATGCATGCGATACCTCTGAAACAAGGATGTTGGTTTACGAGAGGCTAAGCAATGGGAGCTTGGACAGCCTGTTGTTCAGGAGACCTGACGGCCCTTCGATTGATTGGAACACAAGAATGAAAATCGCCTTCTCTGCTGCACAAGGTCTTACTTTCTTGCATGACGAAGGGTCTTTTAAGGCAATGTATACTGATTTTTCAGCAGCGAACATACAGATTGATATAGATTTCAATGCAAAGCTTTCAGGATATGGTTTTGTTGGAAATATTGCTCAGGAAACGTTTTCAAGAAGATCAGCTGCGGCAGGAAATCTTTCTGTGGAGACATGGAGAAAAGGAAAGCTTACTCCAAAGAGCAATATATGGAGTTTTGGAATTATTCTTCTGGAGCTACTTACAGGAAGAAAGAATTTTGACATAAATCTCCCCAAGAGAGAGAGGAACTTAGTTAAATGGTGTCAGCCTTTCTTAGCCGACAACTTGTCTGTGATCATGGATCCTCAACTTGAAGGTCGGTTTCCGCCCAAAGCAGCAAGAATAGTAGCTGGCATTGCACAAAGATGCCTCCAAAAGGAACCATCAGAAAGACCAACCATGAAAGTCATTGTTGAGAATCTGATAATCTTACTAGATATGCAGTACCCTCGTTGGTTCCAACTGCACGACCCAGCCGCTGTGTACAGAAGACAAATGGCGGAATCACTAAATGTTGATGGTATCAGTTATGGACCTAGTTTGGGTTTCTCTCCTCCGTGCCTACCATCAATTGGAACATCTCCTTCACATCCTCCAAGATGGTCTTCTGTTCCCGTAGCGCTTCCTCCTCCTCTTGCCCGTTCCTCCACTGTCATTACTGAGGAGATCACCAGGGAAGAAAGTACAAAGCAATCATCCTCAGTATCAGAGAAAGCTTAG 1761 0.4344 MGCLTVIKNMKKKYERSKSQIGSRNEKVSTAMPQLQASRSLHFDPQNPKTSVKSPNPINQVTNNRTRTLSAPSALQDAEALASVEQEEGEMSKSLARLMKVAPLPSPVPSPLPLPLPSPRNRGPLKLRMASDPFYASGSGNDTAEQDGVETFQCDAREWYKNRDRSMKKMHLARPLPLPPKGRYPLKATSSPKPETVIDPVRFFLYEEIVAACHNFRWDRCMAECFSSTIYKASFFHEASCKKLKATVTRLHPSTQGLREFMNEVSSLAKIQHPNICKLLGFYACDTSETRMLVYERLSNGSLDSLLFRRPDGPSIDWNTRMKIAFSAAQGLTFLHDEGSFKAMYTDFSAANIQIDIDFNAKLSGYGFVGNIAQETFSRRSAAAGNLSVETWRKGKLTPKSNIWSFGIILLELLTGRKNFDINLPKRERNLVKWCQPFLADNLSVIMDPQLEGRFPPKAARIVAGIAQRCLQKEPSERPTMKVIVENLIILLDMQYPRWFQLHDPAAVYRRQMAESLNVDGISYGPSLGFSPPCLPSIGTSPSHPPRWSSVPVALPPPLARSSTVITEEITREESTKQSSSVSEKA 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01295 586 SUPERFAMILY Protein kinase-like (PK-like) 193 498 IPR011009 -
Vivi5g01295 586 Gene3D Transferase(Phosphotransferase) domain 1 298 495 - -
Vivi5g01295 586 MobiDBLite consensus disorder prediction 13 73 - -
Vivi5g01295 586 ProSiteProfiles Protein kinase domain profile. 216 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g01295 586 MobiDBLite consensus disorder prediction 23 73 - -
Vivi5g01295 586 PANTHER OS01G0588500 PROTEIN-RELATED 144 488 - -
Vivi5g01295 586 Pfam Protein tyrosine and serine/threonine kinase 223 488 IPR001245 GO:0004672|GO:0006468
Vivi5g01295 586 MobiDBLite consensus disorder prediction 567 586 - -
Vivi5g01295 586 Gene3D Phosphorylase Kinase; domain 1 185 296 - -
Vivi5g01295 586 MobiDBLite consensus disorder prediction 562 586 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01295 Vivi-Chr5 35069844 35072763 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g01295 204 491 Glycoside Hydrolase AT3G07070 38.851 9.96e-58 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Vivi5g01295 PK_Tyr_Ser-Thr 1.6e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01295 - - aprc:113849641 557.37