Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01273 ATGATAAGAAGACTTGGATTGAAAGATCTTGTTTGTTGGGAGTTTCTTCATAGATTTGAAGATGTTGTTCTCTCTGTCATTAGATCAGATTCAAAGTTCATGAGTTATCTACCTTCTGTTTTGGCAACTGCTACAATGATTCATGTTTTCAACAGTGTTGACCCTAGTTTAGGAGATGAATACAAAAACCAGCTTCTTGGTATTCTTGGAATCAACAAAGAAGAAGTGGATGAATGTGGGAAGCTGATGATGAAAGTGTGGAGAGAATATGAAGAGAATGAGAATGGATTCAACAAACGTAAGTTTGGGTCAATTCCAAGTAGTCCAAACGGTGTAATTGATGTGTCATTTAGCTGTGAAAATTCCAATGATTCATGGGCTATATGA 387 0.3618 MIRRLGLKDLVCWEFLHRFEDVVLSVIRSDSKFMSYLPSVLATATMIHVFNSVDPSLGDEYKNQLLGILGINKEEVDECGKLMMKVWREYEENENGFNKRKFGSIPSSPNGVIDVSFSCENSNDSWAI 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01273 128 Gene3D - 1 89 - -
Vivi5g01273 128 Pfam Cyclin, C-terminal domain 12 102 IPR004367 -
Vivi5g01273 128 SUPERFAMILY Cyclin-like 26 95 IPR036915 -
Vivi5g01273 128 CDD CYCLIN_AtCycD-like_rpt2 2 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01273 Vivi-Chr5 33902878 33904030 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g01273 1 86 Core Cell Cycle Gene Families AT4G34160 46.512 2.88e-19 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01273 K14505 - vvo:131606487 264.233