Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01237 ATGGGTGATATCCGAGTCCTCTCTACGGATACAATCAAGGCAGCAAAATCCAGTGATACAAGAATCAATTTGACTCCATGGGATCTCCAACATCTACATGCTCCATCTAACAAAAAAGGCCTTCTTTATCACCATCCATTAGTAGCAAATCAAATCCAACATCTAAAACACTCTCTATCCTATGTCCTTGAATTTTTCCAACCTCTTGCAGGTCGTCTCAACATAACAGAACACAAAGACAATATTATCTCGTGTTCTGTTATTTGCAACAATGCAGGTGTACTCTTTAATCATGCCGCGGTGGAAAATATTTGTGTTGCTGACATCCTAGAGCCCATCTACGTTCCTTCAATTGTCAGTTTATTTTTTCCTTTTATCGGAGTTAGTAACCATGAAGGCACATCACAACCATTGTTGGCTATTCAAGTTACGGAGCTAGTTGATGGCATCTTTATTGGTTGCACAGTCAACCATGTGGTTGTTGATGGAAATTCCTTATGGCATTTCATTAATTCATGGGCTGAAATTTCACGTGGTTCTTGTCATCGTCGTATATCCAAACTTCCAATACTAGAACGTTGGTTTCCTAATGATATCCAACATCCCATACAATTTCCTTTTACTATAGAGCCACAAAAGAATCACTCTGATGGACGGAGTTCTTCACCATCTAATGATGAAGAACTCAATATATCAGAGAGATTATTTCATTTCAAAAAGGAGAAAATCTTGCAACTAAAATCAAAAGTCAATACACATATCGATAATACCATCAAAATATCCTCCTTACAAGCGCTTTTAACTCATGTTTGGTGCTCCTTCGTTCGTTCCAAACAATTTGATTCACAGGAAGAAATTCATAACATGTTTTTGATAGGGGTTAGACCAAGATTACTTCCACCATTGGAAGAAGGTTATTTTGGAAATGCAATTATAGGTTGCATGGTTACCATGAAAGCTGGAGAGTTGTTAAAAGAAGGTGGTGTTTGTAATGGTGCTTGGGAGATGAACAAGTTAATTGCTTCACACTCTAATGAGAAGATAAAGAATCACTACGAATCTTGGTTGAAAAGTCCAATTATTTTTAGGTTTAACAGTAGACCGAATAATAATTTCTTAATCATGAGCAGTTCTCCTCGGTTTGATGTTTATGGTAATGATTTTGGATGGGGAAAGCCAGTGGCAGTTCGGAGTTCAAATAAATCAAATGGAATTGTTAGTGTGTTTCCAGGAATAGAAGAAGGAAGTATTGATCTTCAAATCCGTCTTCCTTACAATATTTTAGAGGCAATGGAAAATGACCTCACTTCATGTGAAGGTTGTGTCCAATTGATGCAAAGTTATGATTTATAA 1353 0.3688 MGDIRVLSTDTIKAAKSSDTRINLTPWDLQHLHAPSNKKGLLYHHPLVANQIQHLKHSLSYVLEFFQPLAGRLNITEHKDNIISCSVICNNAGVLFNHAAVENICVADILEPIYVPSIVSLFFPFIGVSNHEGTSQPLLAIQVTELVDGIFIGCTVNHVVVDGNSLWHFINSWAEISRGSCHRRISKLPILERWFPNDIQHPIQFPFTIEPQKNHSDGRSSSPSNDEELNISERLFHFKKEKILQLKSKVNTHIDNTIKISSLQALLTHVWCSFVRSKQFDSQEEIHNMFLIGVRPRLLPPLEEGYFGNAIIGCMVTMKAGELLKEGGVCNGAWEMNKLIASHSNEKIKNHYESWLKSPIIFRFNSRPNNNFLIMSSSPRFDVYGNDFGWGKPVAVRSSNKSNGIVSVFPGIEEGSIDLQIRLPYNILEAMENDLTSCEGCVQLMQSYDL 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01237 450 Gene3D - 228 437 IPR023213 -
Vivi5g01237 450 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 6 434 - -
Vivi5g01237 450 Pfam Transferase family 5 434 - -
Vivi5g01237 450 Gene3D - 2 204 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01237 Vivi-Chr5 32812819 32814559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g01237 29 423 Monolignol Biosynthesis Gene Families AT5G48930 26.747 4.71e-28 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01237 - - vvo:131606449 613.224