Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01192 ATGATGAAGAAGTGGTTTATACATTCCCAGGCTCTTCTTGGAATGCTGTTAGTGCAGCTTTTTGCAACTGGGATGCAAGTTTTGTCAAGGGTGATCTTGATTCAAGGAGCATATATTTTTTCCTTAATTACGTATCGGCACATTGTTGGGGCAATTTGTGTTGCCCCGTTCGCAATCTACTTTGAAAGAGGACAAGCAAAGAAGTTCAATTGTAGAGTTTGTTTCTGGCTTTTTGCTAATGCATTAGCAGGGATGACATTGTCTCTAGCATTATTTTATTATGGTGTTCGTGACACATCGGCCACTTATGCTGTCAATTTTCTTAACTTGATACCTATTTCTACATTCCTGGCCTCCATCATATTCAGGATGGAAAGTCTTAGAATTGGAACATGGGGTGGTAGAGCAAAGGGTCTCGGGACGCTTATTTGCGTGGCCGGAGCTATAATTACAAGTCTATATAAAGGGAAGGTGTTTTATATTGGTCATCATAGTAACCATGCTCAGATGATCATTGTGGCAGCACCCCAAATTAACATGCTTCGCGGAACTTTCTTTTTGGTTGGATCTTGTTGTTCATACACTACATGGTTTATTATGCAAGTTAAGTTGGCTGAAGTATTTCCTTTGAGATATTGGAGAACATTTTTGTCATGCGTTATGGCAGCACTTCAGTCCGCGGTTATAGGCGCTTGCTTTAATTATAGTAAAGAAGCTTGGAGATTAGAGTGGAATCTCCAGCTCATTACTATAATTTACTCGGGAGCATTGGCAACTGCCGCCACATTTTGTCTAATATCCTGGGCAGTTACTATCAAAGGTCCTACATACCCATCCATGTTCAATCCGCTTGCCCTTGTTCTTGTTGCCTTATCAGAGGCTATCTTGCTGGGTGAACCACTGCATGTTGGACAGTTGTTGGGCATGGTTTTAATCATACTGGGGATATATTCTTTTCTGTGGGGTAAGAAGAATGAGATGCATTTACCTCAGGAGATAAGTGCAGCAGCAGGACCAAGTTATTCACCGGATGAAAGTGTACTTGAAATTGATATCTGA 1059 0.4108 MMKKWFIHSQALLGMLLVQLFATGMQVLSRVILIQGAYIFSLITYRHIVGAICVAPFAIYFERGQAKKFNCRVCFWLFANALAGMTLSLALFYYGVRDTSATYAVNFLNLIPISTFLASIIFRMESLRIGTWGGRAKGLGTLICVAGAIITSLYKGKVFYIGHHSNHAQMIIVAAPQINMLRGTFFLVGSCCSYTTWFIMQVKLAEVFPLRYWRTFLSCVMAALQSAVIGACFNYSKEAWRLEWNLQLITIIYSGALATAATFCLISWAVTIKGPTYPSMFNPLALVLVALSEAILLGEPLHVGQLLGMVLIILGIYSFLWGKKNEMHLPQEISAAAGPSYSPDESVLEIDI 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01192 352 Gene3D - 213 325 - -
Vivi5g01192 352 PANTHER WAT1-RELATED PROTEIN 12 331 IPR030184 GO:0016020|GO:0022857
Vivi5g01192 352 SUPERFAMILY Multidrug resistance efflux transporter EmrE 240 324 - -
Vivi5g01192 352 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 153 - -
Vivi5g01192 352 Pfam EamA-like transporter family 182 319 IPR000620 GO:0016020
Vivi5g01192 352 Pfam EamA-like transporter family 12 152 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01192 Vivi-Chr5 30235399 30246227 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g01192 13 324 Nodulin-like Gene Family AT1G09380 35.849 1.27e-63 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01192 - - gmx:100792281 466.077