Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01182 ATGAGTAACTCAGAGAATATTGAAAATGTGAAGAAGTGGTTCATGTCTTCTAAACCACTTCTTACCATGTTGTTAGTGCAAATTGTTTCAACTGGAATGCAACTTTTGTCAAGGGTAATCTTGGTCCGGGGCACTTTTATTTTTGCACTCATTACTTATCGATATCTTGTTGCTGCTATTTGTGTTGTTCCCTTTGCACTCTATTTTGAAAGAGAACAAGTGAAGACATTCAGTTTCAATTGGAAAGTTTGGATCTTCCTTTTCGTTAATGCATTAGTGGGGATGACAATGGCTATAGGATTGTTCTATTATGGTCTTCGAGATACATCTGCTACTTACGCTGTTAACTTTCTTAACATGATTCCCATTTTCACATTTTTGATATCTATCATAGTAAGAATGGAAGATCTAAATATTAGGACATGGAGTGGTATAACTAAATGTCTTGGGGCAATTTTATGTGTTGGTGGAGCATTATCTATAAGTCTTTACAAAGGAAAGGAATTTTATATTGGTCATCACAGTCGCCATGCTGAGATGAATATTGTTGGAGCACATAAAAGTCACATGCTTCGTGGCACTTTATTTTTGATTGCATCTTGCTGTTGTTCCACATCTTGGTTTATTATGCAAGTTCGGTTGGCTAAAGTATTTCCACTTAGGTATTGTGCAACAATGATGTCATGCTTTATGACATCAATTCAGTCAGCAATAATAGGTGCAGGCATAAATTCCAGTAAGGAAGCTTGGAAACTAGAATTGAATCTGCAACTCATTACTATCGTTTATGCGGGAGTATTGGCTACTGCTGTAACATTTTGTTTATTATCGTGGACAATAGCATTAAAGGGACCAACTTATCCATCAATGTTCAATCCATTGGCTCTTGTTTTTGTTGCCATTTCAGAGACTTTCATACTTGGTGAACCAATACACGATGGAACGTTACTAGGCATGGTTTTAATCATAATGGGATTATATTCCTTCTTATGGGCTAAGAGTAATGAGATGCCTCATTTTCATCAATCAAATGTAGGAATTATAGAATTATCAACAAGCAGGAGAGAAGATCCTACAGTTACAAATTAA 1089 0.3581 MSNSENIENVKKWFMSSKPLLTMLLVQIVSTGMQLLSRVILVRGTFIFALITYRYLVAAICVVPFALYFEREQVKTFSFNWKVWIFLFVNALVGMTMAIGLFYYGLRDTSATYAVNFLNMIPIFTFLISIIVRMEDLNIRTWSGITKCLGAILCVGGALSISLYKGKEFYIGHHSRHAEMNIVGAHKSHMLRGTLFLIASCCCSTSWFIMQVRLAKVFPLRYCATMMSCFMTSIQSAIIGAGINSSKEAWKLELNLQLITIVYAGVLATAVTFCLLSWTIALKGPTYPSMFNPLALVFVAISETFILGEPIHDGTLLGMVLIIMGLYSFLWAKSNEMPHFHQSNVGIIELSTSRREDPTVTN 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01182 362 Pfam EamA-like transporter family 195 329 IPR000620 GO:0016020
Vivi5g01182 362 Pfam EamA-like transporter family 19 155 IPR000620 GO:0016020
Vivi5g01182 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 254 333 - -
Vivi5g01182 362 PANTHER WAT1-RELATED PROTEIN 18 341 IPR030184 GO:0016020|GO:0022857
Vivi5g01182 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01182 Vivi-Chr5 30019691 30023959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g01182 19 334 Nodulin-like Gene Family AT1G09380 34.985 4.01e-59 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01182 - - gmx:100782551 453.366