Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01155 ATGGATGTTGTCAAAATCCTCTCAACTGATACAATCAAGGCATTAAAATTCAGTGATAAAGAAATCGATTTGACTCCATGGGATCTCCAGTATTTTTCTGGTACACCCAACAAAAAAGGCCTTCTTTATCACCACCCAGTAGTATCAAACCAAATTCAACAGTTAAAACACTCTTTATCATCTGCACTTGAATTTTTTCAACCTCTTGCAGGTCGTCTCAAAATAACGGACCACAAAGACGATATTATCTCGTGTTCCGTTATTTGCAACAATGCAGGTGTGCTCTTTACTCATGCATCTGTAGAAAATACTTGTGTTGCAGATATCTTAAAACCTACCTACGTTCCTTCAATCATCGGTTCATTTTTCCCTTTCGTCGGGGTTAAGAACTATGAAGGAACGTCACAGCCGTTGTTGGCTGTTCAAGTCACGGAGCTAGTCGATGGCATCTTCATTGGTTGCACATTTAACCATGTGGTTGTTGATGGAAATTCCATCTGGCATTTCATTAATTCATGGGCTGAAATTTCACGTGGTTCTTGTCATCATCAAATATCGAAACTTCCAATATTGGATCGTTGGTTTCCAGATGGTGTTCAACGTCCCATACAATTTCCTTTTACGATAGAGCCACACAAAAATCACTCTGATGGGGCGAGTTCTTCACCATTTGATGAAGAACCCAATCTATCAGAGAGAATATTTCATTTCTCAAAGGAGAAAATCTTGCAAATGAAATCAAATATCAATAAACAAATTGATAATACTATCAAAATATCTTCCTTACAAGCGATTTTAACTCATGTTTGGTGCTCTTTCGTTCGTTCCAAACAATTTGATCCACAAGAAGAAACCCATAACATATGTTTGATAGGGGTTGGACCACGAATTGTTCCACCATTGCCAGAAGGTTATTTTGGAAATGCAATTATAGGTTGTATAACTACAATGAAAGCCGGAGATTTGTTGAAGGAAGATGGTGTATGCAACGGCGTGAGTGAGATGAACAAGTTAATTGCTTCACACTCTAATGAGAAGATAAAAAATCACTACAAATCTTGGTTGAAAAATCCAAATATTATTAAGCGTAGTAGCAAGCCGAAAGATAATTTCTTACTCATAAGCAGTTCTCCTCGTTTTGATGTTTATGGTAATGACTTCGGATGGGGAAAGCCAATGGCAGTTCGGAGTTCAAATAAATTAAATGGAGTTGTTAGTGTGTTTGCTGGAATAGAAGAAGGAAGTATTGATCTTCAAATCCGTCTTCCTTTCAATATTTTAGAAGCAATGGAAAATGACTTTAGTTCATAA 1311 0.3707 MDVVKILSTDTIKALKFSDKEIDLTPWDLQYFSGTPNKKGLLYHHPVVSNQIQQLKHSLSSALEFFQPLAGRLKITDHKDDIISCSVICNNAGVLFTHASVENTCVADILKPTYVPSIIGSFFPFVGVKNYEGTSQPLLAVQVTELVDGIFIGCTFNHVVVDGNSIWHFINSWAEISRGSCHHQISKLPILDRWFPDGVQRPIQFPFTIEPHKNHSDGASSSPFDEEPNLSERIFHFSKEKILQMKSNINKQIDNTIKISSLQAILTHVWCSFVRSKQFDPQEETHNICLIGVGPRIVPPLPEGYFGNAIIGCITTMKAGDLLKEDGVCNGVSEMNKLIASHSNEKIKNHYKSWLKNPNIIKRSSKPKDNFLLISSSPRFDVYGNDFGWGKPMAVRSSNKLNGVVSVFAGIEEGSIDLQIRLPFNILEAMENDFSS 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01155 436 Pfam Transferase family 4 435 - -
Vivi5g01155 436 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 6 433 - -
Vivi5g01155 436 Gene3D - 227 436 IPR023213 -
Vivi5g01155 436 Gene3D - 1 204 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01155 Vivi-Chr5 28869406 28870716 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g01155 53 393 Monolignol Biosynthesis Gene Families AT5G48930 28.571 6.67e-31 121