Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01153 ATGGATGTTGTCAAAATCCTCTCAACTGATACAATCAAGGCATTAAAATTCAGTGATAAAGAAATCGATTTGACTCCATGGGATCTCCAGTATTTTTCTGGTACACCCAACAAAAAAGGCCTTCTTTATCACCACCCAGTAGTATCAAACCAAATTCAACAGTTAAAACACTCTTTATCATCTGCACTTGAATTTTTTCAACCTCTTGCAGGTCGTCTCAAAATAACGGAACACAAAGACGATATTATCTCGTGTTCCGTTATTTGCAACAATGCAGGTGTGCTCTTTACTCATGCATCTGTAGAAAATACTTGTGTTGCAGATATCTTAAAACCTACCTACGTTCCTTCAATCATCGGTTCATTTTTCCCTTTCGTCGGGGTTAAGAACTATGAAGGAACGTCACAGCCGTTGTTGGTTGTTCAAGTCACGGAGCTAGTCGATGGCATCTTCATTGGTTGCACATTTAACCATGTGGTTGTTGATGGAAATTCCATCTGGCATTTCATTAATTCATGGGCTGAAATTTCACGTGGTTCTTGTCATCATCAAATATCCAAACTTCCAATATTGGAACGTTGGTTTCCAGATGGTACTCAACTTCCCATACGTTTTCCTTTTTCGCTGGATTTACAAAAGAATCACTCTGATGGGACGAGTTCTTCAACATCTGATGAAGAACTCCATATATCAGAGAGGTTATTCCATTTCACAAAGGAAAAAAATTTGCAACTAAAATCAAAAGTCAATGCAGAAATTGATAGTACCTTCCAAATATCTTCTCTACAAGCGCTTTTTAGTCACGTTTGGTGCTCCATTATTCGTTCCAAACAAATTAATCCACAAGAACAAGTCCATAGTATATTAATGATAGGGGTTAGACCAAGATTTGTTCCACCATTGCCGGAAGGTTATTTTGGAAATGCATTTAAAGGTGGCATGGTTGCGATGAAAGCTGAGGAGTTGGTGAAGGAAGATGGTGTTCGTAACACCTCCCTAGAGATAAACAAGTTAATTGCATCACACTCTAATGAGAAGATAAAGAATCACTTTGACTTTTGGTTGAAAAATCCAAATGTTTTTATACCTAAGAGCATGCCGAATAATTTATTAATCATGAGTAGTTCTCCACGATTTGATGTTTATGGTAATAATTTTGGATGGGGAAAGCCGGTTGCAGTTCGTAGTTCAAATTAA 1197 0.3751 MDVVKILSTDTIKALKFSDKEIDLTPWDLQYFSGTPNKKGLLYHHPVVSNQIQQLKHSLSSALEFFQPLAGRLKITEHKDDIISCSVICNNAGVLFTHASVENTCVADILKPTYVPSIIGSFFPFVGVKNYEGTSQPLLVVQVTELVDGIFIGCTFNHVVVDGNSIWHFINSWAEISRGSCHHQISKLPILERWFPDGTQLPIRFPFSLDLQKNHSDGTSSSTSDEELHISERLFHFTKEKNLQLKSKVNAEIDSTFQISSLQALFSHVWCSIIRSKQINPQEQVHSILMIGVRPRFVPPLPEGYFGNAFKGGMVAMKAEELVKEDGVRNTSLEINKLIASHSNEKIKNHFDFWLKNPNVFIPKSMPNNLLIMSSSPRFDVYGNNFGWGKPVAVRSSN 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01153 398 Gene3D - 3 203 IPR023213 -
Vivi5g01153 398 Pfam Transferase family 4 396 - -
Vivi5g01153 398 Gene3D - 228 398 IPR023213 -
Vivi5g01153 398 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 6 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01153 Vivi-Chr5 28837668 28856635 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g01153 53 392 Monolignol Biosynthesis Gene Families AT5G48930 28.022 5.19e-27 109