Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01151 ATGGGTGTTGTGAGAGTTCTCTCTACCGATACAATCAAGGCACCAAAATCCAGTGACAGAAAAATTGATTTGACTCCATGGGATCTTCAATTTCTATCTATTTTAACCAACAAAAAAGGTCTTCTTTATCACCATCCACCCGTCGCAAACCAAATCCAACAACTAAAACACTCTCTATCCTCCGTTCTTGAATTTTTTCAACCTCTTGCAGGTCGTCTCAAAATAACGGAACACAAAGATAATATTATCTCGTGTTCCGTTATTTGCAACAACACAGGTGTTCTTTTTATTCATGCTGTTGTGGAAAATACTTGTGTTGCTGATATCTTAGAACCTATCTACGTTCCTTCAATTGTCAATTCATTTTTCCCTTTTATCGGAGTTAGTAATTATGAAGGTACATCACAACCATTGTTGGGTGTTCAAGTCACGGAGCTAGTTGATGGTATCTTCATTGGTTGCACATTTAACCATGTGGTTGTTGACGGAAATTCCTTATGGCATTTCATCAATTCATGGGCTGAAATTTCACGTAATTCTTGTCATCATCATATATCCAAACTCCCAATACTAGAACGTTGGTTTCCTAATGATATTCAACATCCAATTCAATTTCCTTTTACTATGGATCCATCTGATGACGGGTCCAGTTCTTCACCATCTGAAGATGAGAGACTCAATATATCAGAGAGAATATTTCACTTCAAAAAGGAGAAAATCTTTCAACTAAAATCAAAAATCAATACACATATTGACAGTACCATCAAAATATCCTCTCTACAAGCGCTTTTAACTCATGTTTGGTGCTCCTTTGTTCGTTCCAAACAATTTGACCCACAGGAAGAAATTCATAACAGGTTTGCAATAGGGGTTGGAACAAGATTACTTCCACCATTGCCAAAAGGTTATTTTGGAAACACAGTTATAGGTTGCATGGTTACCATGAAAGCTGGAGAGTTGTTGAAGGAAAATGGGCTTCGTAATGGTGCTTGGGAGATGAACAAGTTAATTGCTTCATACTCTAATGAAAAGATAAGGAATCATTACGAATCTTGGTTGAAGAATCCAAATATTGTAAGGTTTAACGGCATACTGAATAATAATTTCTTAGTCATAAGTAGTTCTCCACATTTTGATGTGTATGGTAATGATTTTGGATGGGGAAAGCCAGTGGCAGTTCGGAGTTCAATTAAAGTAAATGGACTTGTTACTGTGTTTGCTGGAGTAGAAGAGGGTAGCATTGATCTTCAGCTATGCCTTCCTTACAATATTTTAGAGGCAATGGGAAATGACCTTCAGCTCATGGATCTTGTGTCCAATTGA 1323 0.3704 MGVVRVLSTDTIKAPKSSDRKIDLTPWDLQFLSILTNKKGLLYHHPPVANQIQQLKHSLSSVLEFFQPLAGRLKITEHKDNIISCSVICNNTGVLFIHAVVENTCVADILEPIYVPSIVNSFFPFIGVSNYEGTSQPLLGVQVTELVDGIFIGCTFNHVVVDGNSLWHFINSWAEISRNSCHHHISKLPILERWFPNDIQHPIQFPFTMDPSDDGSSSSPSEDERLNISERIFHFKKEKIFQLKSKINTHIDSTIKISSLQALLTHVWCSFVRSKQFDPQEEIHNRFAIGVGTRLLPPLPKGYFGNTVIGCMVTMKAGELLKENGLRNGAWEMNKLIASYSNEKIRNHYESWLKNPNIVRFNGILNNNFLVISSSPHFDVYGNDFGWGKPVAVRSSIKVNGLVTVFAGVEEGSIDLQLCLPYNILEAMGNDLQLMDLVSN 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01151 440 Gene3D - 209 429 IPR023213 -
Vivi5g01151 440 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 7 435 - -
Vivi5g01151 440 Pfam Transferase family 5 431 - -
Vivi5g01151 440 Gene3D - 3 203 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01151 Vivi-Chr5 28802744 28804329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g01151 53 420 Monolignol Biosynthesis Gene Families AT5G48930 27.366 1.64e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01151 - - vvo:131606449 593.964