Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01150 ATGGATTACGAACCCTATGACAGTAGTGGAACCGATGATGATCTTCCGCCAACTCATCAAAATAGAATTCCCAGGGGAGGACGTCTTGCCGGGAATGGAAGATCTGCCGTTGGTTCAATTCCATACCCCAGGGTGTATGGTGAAATTGATATGGAAACCCAAATTCATCAACTTGAGCAGGATGCATACAGTTCAGTTCTGAGAGCCTTTAAAGCTCAAGCTGATGCCATTACTTGGGAGAAAGAAAGTTTGATTACAGAGCTGAGAAAAGAGCTAAGATTATCTAACGAGGAACACAGAGAACTCTTAGGTCGGGTTAATGCGGATGACACAATACGGAGGATAAGGGAATGGAGACAGACAGGTGGCCATCAGTCTGGCGTAATGAATACTGGTCAAGCTCTACATGATTCAATTCCCAGTCCGTCGGTTTCTGCATCTCGCAAAAAGCAGAAGATTACACCACCTGTACCACCACGTTCTTTTGGTGGGCCTTCTCCCCCATTTCACCCCCAAACGGTGACTGCATCCCATCAGCCATCTTCTTCTGCAGCAAAACGAGGATCTGTTCCTGGATCTAAGGGAAAGAAGCAAAAATCTGGTCCAATATTACCTGGTGTATCTTCGAAGCAGTTTCCTCCATCAGGACTAGGTGGAAGAAATCAAGTACAGAATCAAGTACAGAATCAAGTATCTAATAGACCTGTCATGGTTGAACATGCCGAGGGTGTTTCTTTTGGTCCTATGATCGGTAGGAGAGTGAGGACAAGATGGCCTGACGACAATAACTTCTACGAAGCTGTTATCTCTGACTACAATCCAGTTGATGGCCGGCATAATCTAGTCTATGACATGGGGAGTACGAATGAAACATGGGAATGGGTTAAACTATCAGAGATATCTCCTGAAGATATTCAGTGGGTACCTGAGGATCCTGGAATTAATCATCGTGGGGGTTTTGTGGGCTCTGGTCATGGGATCAATAGGTCTGTCGGACGTGATAGTGTTCCAGGAGTTGGAAGAGGTAGAGGGGTTCCAAAAGGTCAATCTAGAAAAGATGTTTTGTCATCACAGAATGGTGCAGGAAAGAAGGCTCCTGATGATATTCAGATTCTTCACACAGACACACTAATACAGGAGGTGGAGAGGGTATTTAGTGCAAATCATCCTGATCCTCTTGAAATAGAGAAAGCAAAGAAAGTATTGAGGGAGCATGAGCAGTCTCTTGTTGATGCGCTTGCAAGACTTGCCGATCTTTCTGACGGTGAAAGTGACGGGGCTGGTCATCATTTCCCACAGCGTCGGTCAATGGATCGAGAATGA 1323 0.4543 MDYEPYDSSGTDDDLPPTHQNRIPRGGRLAGNGRSAVGSIPYPRVYGEIDMETQIHQLEQDAYSSVLRAFKAQADAITWEKESLITELRKELRLSNEEHRELLGRVNADDTIRRIREWRQTGGHQSGVMNTGQALHDSIPSPSVSASRKKQKITPPVPPRSFGGPSPPFHPQTVTASHQPSSSAAKRGSVPGSKGKKQKSGPILPGVSSKQFPPSGLGGRNQVQNQVQNQVSNRPVMVEHAEGVSFGPMIGRRVRTRWPDDNNFYEAVISDYNPVDGRHNLVYDMGSTNETWEWVKLSEISPEDIQWVPEDPGINHRGGFVGSGHGINRSVGRDSVPGVGRGRGVPKGQSRKDVLSSQNGAGKKAPDDIQILHTDTLIQEVERVFSANHPDPLEIEKAKKVLREHEQSLVDALARLADLSDGESDGAGHHFPQRRSMDRE 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01150 440 Coils Coil 85 105 - -
Vivi5g01150 440 MobiDBLite consensus disorder prediction 123 150 - -
Vivi5g01150 440 MobiDBLite consensus disorder prediction 422 440 - -
Vivi5g01150 440 MobiDBLite consensus disorder prediction 168 188 - -
Vivi5g01150 440 FunFam Protein EMSY-LIKE 3 isoform A 46 176 - -
Vivi5g01150 440 ProSiteProfiles EMSY N-terminal (ENT) domain profile. 51 138 IPR005491 -
Vivi5g01150 440 MobiDBLite consensus disorder prediction 419 440 - -
Vivi5g01150 440 SUPERFAMILY ENT-like 46 156 IPR036142 -
Vivi5g01150 440 Gene3D - 248 304 - -
Vivi5g01150 440 Coils Coil 395 415 - -
Vivi5g01150 440 MobiDBLite consensus disorder prediction 120 221 - -
Vivi5g01150 440 FunFam Protein EMSY-LIKE 3 248 300 - -
Vivi5g01150 440 CDD Tudor_Agenet_AtEML-like 250 307 - -
Vivi5g01150 440 MobiDBLite consensus disorder prediction 321 367 - -
Vivi5g01150 440 SMART ENT_2 51 124 IPR005491 -
Vivi5g01150 440 SUPERFAMILY Tudor/PWWP/MBT 249 288 - -
Vivi5g01150 440 Gene3D ENT domain 46 154 IPR036142 -
Vivi5g01150 440 Pfam ENT domain 53 120 IPR005491 -
Vivi5g01150 440 MobiDBLite consensus disorder prediction 1 35 - -
Vivi5g01150 440 PANTHER PROTEIN EMSY-LIKE 4 11 425 IPR033485 GO:0050832
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01150 Vivi-Chr5 28779569 28794056 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01150 - - gmx:100791651 704.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g01150 5 28779569 28794056 Vivi5g01150 5 28779569 28794056 ECH