Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01137 AACCAAAAACCAAACCATTCTTTCTTTCTTTCTTTTAGAAGGAAAAAAAAAAAAACATCACAAACACTCTTTACAATTTCAATGGCCAAGTCAAAGAACAATGCAAAGAAACTGTCATACATCTCAGTTCCATCTCAAATAATCAACTCCATTTCATCATCTTCTCTTCAATCCTTACTTGATCAAACCCCAAAGAAATCATCAAAAGTTTCCTCAAAGTTCTTCACAACCTTAACAACAAAATGGAAAAGGCCAAGGATGTTTTTGTTCTTCACACTCTTTTTACTTGGTGTTTTTTCCATGTTGAAATTTGGTTTCAATCTAGAAATCCCATTTTCTGTTTACCCTTGTGGTTCAAATTCAAACCCCTTAATCTCAAATGGGTTTGACTCAAAATCTGAACTTGGGTTTGTTTCAGTTAATAAAAATGAGATTTTTAATGGTGGTGTTTTGTCAAAATCTGAACTTGGAGCTGTTTCAATGAAGAAAGATGAGATTTTGAATGATAATGGGATGTTGAAAGAAAAGGGGTCTAGTGGAGTTGACTTGATGGATCAAGGAAAGGGTGAGTTTTGGAAGCAGCCAGATGGGTTAGGGTATAGGCCTTGTTTGGATTTTAGCAGAGATTATAGAAGGGACAGTGATGGGGTTTTGAAGAATAGGAGAAGGTATCTCATGGTGGTTGTTTCTGGTGGGTTGAATCAGCAGAGGAATCAAATTGTTGATGCTGTTGTCATTGCTAGGATTCTTGGTGCTGCTTTGGTTGTTCCTATATTGCAAGTTAATGTCATTTGGGGAGATGAAAGTGAATTTGCTGATATATTTGACTTTGAGCACTTCAAGAATGTTCTTGCCAATGATGTGAGGGTGGTTTCGTCGTTGCCATCAACACACCTGATGACAAAGCCGGTGGAAGGAAGCCCTCCTCTTCATGTCACTCCTAGTTGGATCCGATCGCGCTATCTCAGAAGATTCACCAGAGAAGGTGTTTTGCTTTTACGCGGCTTGGATTCAAGGCTATCGAAGGATCTTCCTTCGGATCTTCAGAAGCTTCGATGCAAGGTTGCTTTTAGTGCATTGAGGTTTGCAAAACCAGTTCAAGAACTCGGCAACAAGATTGCGGATAGAATGAAAAGCAAAGGACCCTATGTCGCCCTTCATCTAAGAATGGAAAAAGACGTGTGGGTGAGGACCGGTTGTTTACCTGGTTTGAGTCCTGAGTTTGACGAAATCGTAAAGAGTGAGAGGATACAACGTCCGGAGCTCTTAACCGGAAGATCAAACATGACTTACCATGAAAGAAAGATGGCTGGTCTTTGTCCCTTAACGGCCATGGATGTTACCAGGTTGCTTAAAGCTTTAGGAGCTCAAAGAGATGCAAGAATTTATTGGGCCGGGGGACAACCCTTGGGCGGAAAAGAAGCATTGCATCCATTAATCCACGAGTTTCCACATCTTTACAATAAGGAAGATCTTGCATTGCCCGGTGAACTAGAACCATTTGCAAAGAAAGCTTCTATAATGGCTGCCATAGATTACATAGTTTCCGAGAAGAGCGACGTTTTCATGCCGTCTCATGGAGGCAACATGGGCCATGCAATTCAGGGTCACAGAGCTTACGCGGGACACAAGAAATATATAACCCCAAACAAAAGACAGATGCTTCCTTATTTTCTGAATCCTTCCCTCCCTGAAGCTGAGTTTAACAGCATTGTCAAGGAATTGCATCAGAATTCATTAGGACAGCCGGAGCTCCGGACAAGCAAGGCCGGAAGAGATGTCACCAAGTATCCTGTCCCTGAATGCATGTGCAACTCACATTCAGATTCGTAA 1833 0.4135 NQKPNHSFFLSFRRKKKKTSQTLFTISMAKSKNNAKKLSYISVPSQIINSISSSSLQSLLDQTPKKSSKVSSKFFTTLTTKWKRPRMFLFFTLFLLGVFSMLKFGFNLEIPFSVYPCGSNSNPLISNGFDSKSELGFVSVNKNEIFNGGVLSKSELGAVSMKKDEILNDNGMLKEKGSSGVDLMDQGKGEFWKQPDGLGYRPCLDFSRDYRRDSDGVLKNRRRYLMVVVSGGLNQQRNQIVDAVVIARILGAALVVPILQVNVIWGDESEFADIFDFEHFKNVLANDVRVVSSLPSTHLMTKPVEGSPPLHVTPSWIRSRYLRRFTREGVLLLRGLDSRLSKDLPSDLQKLRCKVAFSALRFAKPVQELGNKIADRMKSKGPYVALHLRMEKDVWVRTGCLPGLSPEFDEIVKSERIQRPELLTGRSNMTYHERKMAGLCPLTAMDVTRLLKALGAQRDARIYWAGGQPLGGKEALHPLIHEFPHLYNKEDLALPGELEPFAKKASIMAAIDYIVSEKSDVFMPSHGGNMGHAIQGHRAYAGHKKYITPNKRQMLPYFLNPSLPEAEFNSIVKELHQNSLGQPELRTSKAGRDVTKYPVPECMCNSHSDS 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01137 610 PIRSF UCP009360 47 608 IPR024709 -
Vivi5g01137 610 PANTHER OS02G0726500 PROTEIN-RELATED 93 606 - -
Vivi5g01137 610 CDD O-FucT_plant 224 545 IPR024709 -
Vivi5g01137 610 Pfam GDP-fucose protein O-fucosyltransferase 224 540 IPR019378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01137 Vivi-Chr5 28319359 28322659 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g01137 37 605 Miscellaneous Gene Families AT3G07900 64.028 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01137 - - mtr:11428155 957.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g01137 5 28319359 28322659 Vivi5g01137 5 28319359 28322659 ECH