Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01136 ATGAAACTGATAGTCGAGGTCATTAATGCGCATGATCTTATGCCAAAAGATGGCGAAGGATCAGCGAGTACCTTTGTTGAAGTAGACTTTGAAAACCAGTTGAGTCGAACAAGAACTGTCCCTAAAAATCTCAACCCTGCTTGGAATCAAAAACTTGTCTTTCATTTAGATACAACCAAACCTTACCATCACAAAACTATTGAAGTTTCTGTATACAACGAGAGGAGACAACCGATACCTGGCCGAAACTTCCTTGGAAGAGTCAGAATTCCTTGCTCAAATATTGTTAAAGAAGGCGATGAAGTGTATCAGATTTTGCCGCTAGAAAATAAGTGGTTTTTTTCATCTGTTAAGGGTGAGATTGGCCTAAAAGTTTACATTGCATCAGAGTCCAAAGCTGAAAATTTTTTCACTCCCACTTTCACTTCAGAGCTAGAAAAACTCGACCCTTCTAATCCAAAACAAGCACTCGAATCCATAGATACTAACCTTCCTTCTCTTAATCATACTCTCTCAGCCGCAGAAACATTAGAAGCTGATCCGGAAGAGGAAGATCCTGCACTTGACAAACCAAAAGCAACAAGAGAAGAAGCAGAAGTAACATATCCTGTTGCTGCATCCAATTACTCCATTGAAGAAGATCAATCTAGCGGCATTGATATTGATCAAGAGCCAAAGATAGAAGGCAAAAAAGCTTTCCAATTAGATAAACATCAAGCTCACCAGCAACCAAGGATTTCAATAAAGAAAAGGCCACAAGATAATCTATTCACAATGCATTCAGTCGATCCTCATCAAGTTCAACATAGTCATGCCGAAAACTATAATCACAACAATGACTCCAACATGCAGCCGAGGATTTCAATCAAGAGACGACCGCGACCACAAGGTACTCCTTCATCAACAACATACTCAGTTAATCCACAAGTCCAACCTAGGTATGATGAAAGATACAATCTCAAGGGAACCAACCAACAACCAAGGATTTTAGTAGAGACACCAAGGGATGTTTCTCCATCCCCAAGGCACCATGTAGATCCGCAAGTCCACACTAGCAATTTCAAGGGAACCAACCAACAGCCAAGGATTTTAGTAGAGACACCGCGACATGTTTCTTCACCTCCAAGGCACCGTGTAGATCCGCAAGTCCCCACTAGCAATGATGAAGACTACGATCTGAAGGAAACCAATCCACAAATTGGTGAGAAGTGGCCTAGCGGTGGAGGTTATGGTGGAAATAAATGGATGAGTGGTGCTGAGAGATCCACTAGCACACATGACCTTGTTGAGCAGATGTTTTATCTCTATGTCCGTGTTGTGAAAGCAAAGGATCTTCCACCAGGAACCATCACCTCAAGCTGTGATCCTTACGTGGAAGTGAAGCTAGGGAACTATAGAGGAAGAACAAAGCATTTGGAGAAGAAATTGAATCCGGAATGGAACCAAGTATTCGCTTTCTCCAAAGACCGGATTCAATCTTCGATTCTCGAAGTCTTTGTGAGAGATAAGGAAATGATTGGAAGAGATGATTATCTAGGAAGGGTGATCTTTGACCTCAATGAGATTCCAACAAGAGTTCCACCAGATAGTCCATTGGCTCCTCAATGGTACAGACTCCAACACTTGCGAGGCGAAGGCATGGTGAGAGGCGATATTATGCTTGCAGTTTGGATGGGAACACAAGCTGATGAAGCTTTCTCAGATGCTTGGCATTCTGATGCTGCCACTGTCTATGGTGAGGGTGTTTTCAACATCAGATCAAAGGTTTATGTCTCTCCAAAACTATGGTATCTACGTGTCAATGTCATTGAAGCTCAAGATGTTATCCCGAATGACAGAAATCGCTTACCGGAGGTTTCTGTGAAAGCTCAATTAGGATGCCAAGTACTGAAGACAAAGATTTGCTCCACCCGAACCACTACTCCGCTTTGGAATGAAGATTTGGTTTTTGTTGCAGCTGAACCATTCGAGGAGCAATTGACAATAACGGTGGAGGATCACGTGCAACCTTCAAAAGATGAGGTACTAGGGAAGATAAATTTACCATTGAACCTCTTTGATAAAAGGTTAGACCATAGACCGGTTAATTCTCGTTGGTTCAACCTCGAGAAATTTGGTTTTGGAGTCTTAGAAGGTGATAGAAGAAATGATCTTAAATTTTCGAGCAGGATTCACCTTAGAGTTTGTCTTGAAGGTGGATACCATGTCTTAGATGAATCCACATTGTACATAAGTGATCAAAGACCAACAGCAAGACAGCTATGGAAGCAGCCAATTGGAATACTTGAGATAGGCGTCTTAGGAGCAAAAGGGCTTCTCCCTATGAAGATGAAGGATGGACATGGTAGCACAGATGCATACTGTGTTGCCAAATACGGTCAGAAATGGATCAGAACTAGAACACTTTTAGACACTTTCAATCCAAAATGGAATGAACAATACACATGGGAGGTTTATGATCCTTGCACTGTCATAACATTAGGTGTTTTTGACAATTGCCATTTAGGTGAAAAAGCTCCTAGTGGAAGTTCAATCAAAGATTCAAGAATCGGAAAGGTAAGGATTAGGCTATCAACACTTGAAGCGAATAAAATTTACACCAATTCTTTTCCACTACTTGTTTTACACCAACACGGAGTTAAGAAAATGGGTGAGCTTCAACTTGCAGTGAGGTTCACCGCACTTTCACTAGCTAACATTTTTCATATCTATGGCCAACCTTTGCTTCCAAAGATGCATTATTTACAACCTTTCACAGTTAATCAAATCGATAACTTAAGGTACCAAGCAATGAATATTGTAGCAACGAGGCTTGGTAGAGCTGAACCACCTCTCAGAAAGGAAGTAGTTGAGTACATGTTGGATGTTGATTCCAGCATATGGAGCATGAGAAGAAGCAAAGCTAATTTCTTTCGCGTGATGGCACTTTTCTCCGGTTTGATCACAATTGGAAGATGGTTCAACGACGTTTGTCATTGGAAGAATCACATCACATCAATACTAGTCCATATCCTCTTTTTGATACTAACATGGTATCCAGAATTGATACTCCCAACTTTTTTTCTCTACATGTTCTTGACTGGCTTATGGAACTATCGGTTTCGTCCAAGACAACCGCCTCACATGGATACTAAACTCTCATGGGCTGAATCCGTTCACCCTGATGAACTTGATGAAGAGTTCGACACATTTCCAACATCAAGATCACACGATACAGTGAGAATGAGGTATGATAGGCTTCGAACTGTTGCAGGCAGGATTCAAACAATTGTTGGTGACATAGCTACACAAGGGGAGAGGTTCATGTCTCTACTGAGCTGGAGAGACCCCAGAGGAACTACACTCTTTGCGTTGTTTAGTCTTTGTGCAGCTGTGATTTTCTATGCAACACCATTTAGAGTTGTGGTTTTGGTGACCGGTTTGTATCATTTGAGACACCCGAAGTTTAGGAACAAACTGCCTTCTGTACCAAGTAATTTCTTCAAGAGGCTTCCTGCAAGAACAGATAGTTTACTGTGA 3519 0.4152 MKLIVEVINAHDLMPKDGEGSASTFVEVDFENQLSRTRTVPKNLNPAWNQKLVFHLDTTKPYHHKTIEVSVYNERRQPIPGRNFLGRVRIPCSNIVKEGDEVYQILPLENKWFFSSVKGEIGLKVYIASESKAENFFTPTFTSELEKLDPSNPKQALESIDTNLPSLNHTLSAAETLEADPEEEDPALDKPKATREEAEVTYPVAASNYSIEEDQSSGIDIDQEPKIEGKKAFQLDKHQAHQQPRISIKKRPQDNLFTMHSVDPHQVQHSHAENYNHNNDSNMQPRISIKRRPRPQGTPSSTTYSVNPQVQPRYDERYNLKGTNQQPRILVETPRDVSPSPRHHVDPQVHTSNFKGTNQQPRILVETPRHVSSPPRHRVDPQVPTSNDEDYDLKETNPQIGEKWPSGGGYGGNKWMSGAERSTSTHDLVEQMFYLYVRVVKAKDLPPGTITSSCDPYVEVKLGNYRGRTKHLEKKLNPEWNQVFAFSKDRIQSSILEVFVRDKEMIGRDDYLGRVIFDLNEIPTRVPPDSPLAPQWYRLQHLRGEGMVRGDIMLAVWMGTQADEAFSDAWHSDAATVYGEGVFNIRSKVYVSPKLWYLRVNVIEAQDVIPNDRNRLPEVSVKAQLGCQVLKTKICSTRTTTPLWNEDLVFVAAEPFEEQLTITVEDHVQPSKDEVLGKINLPLNLFDKRLDHRPVNSRWFNLEKFGFGVLEGDRRNDLKFSSRIHLRVCLEGGYHVLDESTLYISDQRPTARQLWKQPIGILEIGVLGAKGLLPMKMKDGHGSTDAYCVAKYGQKWIRTRTLLDTFNPKWNEQYTWEVYDPCTVITLGVFDNCHLGEKAPSGSSIKDSRIGKVRIRLSTLEANKIYTNSFPLLVLHQHGVKKMGELQLAVRFTALSLANIFHIYGQPLLPKMHYLQPFTVNQIDNLRYQAMNIVATRLGRAEPPLRKEVVEYMLDVDSSIWSMRRSKANFFRVMALFSGLITIGRWFNDVCHWKNHITSILVHILFLILTWYPELILPTFFLYMFLTGLWNYRFRPRQPPHMDTKLSWAESVHPDELDEEFDTFPTSRSHDTVRMRYDRLRTVAGRIQTIVGDIATQGERFMSLLSWRDPRGTTLFALFSLCAAVIFYATPFRVVVLVTGLYHLRHPKFRNKLPSVPSNFFKRLPARTDSLL 1172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01136 1172 Gene3D C2 domain 757 896 IPR035892 -
Vivi5g01136 1172 FunFam C2 domain-containing protein 743 896 - -
Vivi5g01136 1172 Pfam Plant phosphoribosyltransferase C-terminal 1017 1172 IPR013583 -
Vivi5g01136 1172 CDD C2B_MCTP_PRT_plant 434 560 IPR047257 -
Vivi5g01136 1172 MobiDBLite consensus disorder prediction 294 313 - -
Vivi5g01136 1172 MobiDBLite consensus disorder prediction 265 313 - -
Vivi5g01136 1172 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 2 1172 IPR047259 -
Vivi5g01136 1172 CDD C2D_MCTP_PRT_plant 761 889 IPR047255 -
Vivi5g01136 1172 Gene3D C2 domain 430 576 IPR035892 -
Vivi5g01136 1172 CDD C2C_MCTP_PRT_plant 597 749 IPR047258 -
Vivi5g01136 1172 Gene3D C2 domain 584 729 IPR035892 -
Vivi5g01136 1172 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 129 IPR035892 -
Vivi5g01136 1172 Gene3D C2 domain 1 128 IPR035892 -
Vivi5g01136 1172 Pfam C2 domain 434 529 IPR000008 -
Vivi5g01136 1172 Pfam C2 domain 760 872 IPR000008 -
Vivi5g01136 1172 Pfam C2 domain 596 702 IPR000008 -
Vivi5g01136 1172 Pfam C2 domain 2 97 IPR000008 -
Vivi5g01136 1172 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 596 751 IPR035892 -
Vivi5g01136 1172 ProSiteProfiles C2 domain profile. 738 870 IPR000008 -
Vivi5g01136 1172 MobiDBLite consensus disorder prediction 371 397 - -
Vivi5g01136 1172 MobiDBLite consensus disorder prediction 265 286 - -
Vivi5g01136 1172 SMART C2_3c 434 531 IPR000008 -
Vivi5g01136 1172 SMART C2_3c 597 697 IPR000008 -
Vivi5g01136 1172 SMART C2_3c 761 869 IPR000008 -
Vivi5g01136 1172 SMART C2_3c 2 104 IPR000008 -
Vivi5g01136 1172 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 760 894 IPR035892 -
Vivi5g01136 1172 ProSiteProfiles C2 domain profile. 416 537 IPR000008 -
Vivi5g01136 1172 MobiDBLite consensus disorder prediction 176 199 - -
Vivi5g01136 1172 MobiDBLite consensus disorder prediction 369 408 - -
Vivi5g01136 1172 FunFam C2 domain-containing protein 429 575 - -
Vivi5g01136 1172 FunFam C2 domain-containing protein 583 730 - -
Vivi5g01136 1172 ProSiteProfiles C2 domain profile. 1 106 IPR000008 -
Vivi5g01136 1172 CDD C2A_MCTP_PRT_plant 2 129 - -
Vivi5g01136 1172 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 434 573 IPR035892 -
Vivi5g01136 1172 ProSiteProfiles C2 domain profile. 577 700 IPR000008 -
Vivi5g01136 1172 MobiDBLite consensus disorder prediction 334 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01136 Vivi-Chr5 28240761 28244718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g01136 2 277 Lipid Metabolism Gene Families AT5G48060 42.705 2.18e-44 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01136 - - gmx:100800266 1857.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g01136 5 28240761 28244718 Vivi5g01136 5 28240761 28244718 ECH