Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01115 ATGAATGTGAAGCACACACATAGAAAAAAAAATCATAATATTGAAAGAAGAAAAGAGAATAAAATGGGAGATGATGATAAAGGCACAGTTTGTGTGACAGGAGCAACAGGTTATATAGCATCATGGTTGATTATGAAGCTTCTTCAACATGGTTACAATGTTCATGCTACTGTTAGATCACACCATTTCAAAGAAAATACAAACTTGGAATATCTTACAAGCTTACCAGAAGCAACAATGAAGTTAAAAATCTTTCATGCTAACCTTGACGATTCAACTAGTTTCCAAAAAGCAATACAAGGGTGTATTGGAGTTTTCCATCTTGCACATCCTATGGATGTACAAAACCAAGAGTCGGAAGAAATAGTGACAAAAAGAGCATTGGAAGGAACAAAAGGAATTTTAAAAGCATGTTTAGAATCAAAGACTGTGAAAAAAGTGATTTATACTTCTAGTGCAACAACTGTTTTGTTTAATGGTAAGAATGATCTTGATATGGTGGATGAAGATGTATGGAGTGATATTGAGATTTGTAAAAGTAGTAATCTTGTTGGATCTTCTTATTTGGTGTCTAAAATTTTGACAGAAAAGAGTATTTTAGAGTTTGGAAGAGTGAATGGATTGGAAGTTGTGACTTTGATTCTTCCTTTGGTTATTGGGCCCTTTATTTGTCCTACTATACCATCATCTGTTTATATAGCACTAGCCATGATATTTGGAGACCATAATCGATATGAATATCTCACCATCTCATACATGGTGCACATAGATGATGCGATACGTGCACTTATATTTCTGTTTGAGAGTGAGAATGCTAATGGAAGGTATATTTGTTCCTCGGACCAAATATCATTTCATCAAATGTATGAATTTCTTCATCAAAAATATCCCGAATATCACATAACAATACCAATTTCGATGGAGACAAAAAATGATGAAAAATTTAGTGTTCTATCATCAAAAAAGCTCTTGGATACTGGATTCAAGTTTAAGTATAACGTCGCTGATATATATGATGGAGCTATAAAGTGTTGTAAAGAGAAAGGAATCTTATAA 1056 0.3305 MNVKHTHRKKNHNIERRKENKMGDDDKGTVCVTGATGYIASWLIMKLLQHGYNVHATVRSHHFKENTNLEYLTSLPEATMKLKIFHANLDDSTSFQKAIQGCIGVFHLAHPMDVQNQESEEIVTKRALEGTKGILKACLESKTVKKVIYTSSATTVLFNGKNDLDMVDEDVWSDIEICKSSNLVGSSYLVSKILTEKSILEFGRVNGLEVVTLILPLVIGPFICPTIPSSVYIALAMIFGDHNRYEYLTISYMVHIDDAIRALIFLFESENANGRYICSSDQISFHQMYEFLHQKYPEYHITIPISMETKNDEKFSVLSSKKLLDTGFKFKYNVADIYDGAIKCCKEKGIL 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01115 351 MobiDBLite consensus disorder prediction 1 15 - -
Vivi5g01115 351 Gene3D - 27 351 - -
Vivi5g01115 351 Pfam NAD dependent epimerase/dehydratase family 30 269 IPR001509 -
Vivi5g01115 351 FunFam Dihydroflavonol reductase 27 351 - -
Vivi5g01115 351 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 28 331 - -
Vivi5g01115 351 MobiDBLite consensus disorder prediction 1 25 - -
Vivi5g01115 351 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 26 349 IPR036291 -
Vivi5g01115 351 CDD FR_SDR_e 30 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01115 Vivi-Chr5 27918386 27923789 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g01115 23 342 Miscellaneous Gene Families AT4G27250 35.736 4.50e-63 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01115 - - vvo:131601497 710.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g01115 5 27918386 27923789 Vivi5g01115 5 27918386 27923789 ECH