Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01073 ATGAGACAGTTTGTATGCAGTAAACACGGTCTAAGAGAGATGAAACACTTTAAGAGGGTTGATAGGAAAAGAGAACACAGTCCTACGACCCGCATGAAATGTCCCGCTAGGCTTCGTGTGCATTACAAAGCCGACAAGAATAGATATGTAGTGACGTTTCTTTATGAGACTCACAACCATGAATTAACCCCAACTAGGTTTATACACTTACACCCCATTTATCGTGACATTTCTGAAGCAGATAGAGCTCAGATTAATGGACTTCAGTCACATGGAATTAGAACTTGTCATATAATGGGGTACATGGTTGCTCAGAAGGGTGGATACGTTTGTGTTGGGTTTACAAAGAAGGATATGTATAATTATTTTGATAGAAAAATGCGTGCTACTATTAAAGATGGGGACGTTGCCGCTGCTTTAAATTATCTACATGTGAAGACATCTACTGATCCCATGCTAAATGCTAAATATGTCGTCACCGGTGATGGGCAAATGAAGTCTCTTTTTTGGGCTGATGGGATCAATAGACCTGACTATTTTTGTTTCGGCGATGTGGTTGCATTCGACGCGACTTACAAGAAGAACAAATACAACTACCCATTGGTGATATTTTCAGGGTGCAACCACCATGCTCAAACAGTTATTTTTGGTACTACATTGGTGTCAGATGAAACGACAAATACATATAAGTGA 693 0.3983 MRQFVCSKHGLREMKHFKRVDRKREHSPTTRMKCPARLRVHYKADKNRYVVTFLYETHNHELTPTRFIHLHPIYRDISEADRAQINGLQSHGIRTCHIMGYMVAQKGGYVCVGFTKKDMYNYFDRKMRATIKDGDVAAALNYLHVKTSTDPMLNAKYVVTGDGQMKSLFWADGINRPDYFCFGDVVAFDATYKKNKYNYPLVIFSGCNHHAQTVIFGTTLVSDETTNTYK 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01073 230 PANTHER OS01G0519700 PROTEIN 2 229 - -
Vivi5g01073 230 Pfam MULE transposase domain 185 230 IPR018289 -
Vivi5g01073 230 Pfam FAR1 DNA-binding domain 2 63 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01073 Vivi-Chr5 26170983 26171675 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi5g01073 FAR1 1.9e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01073 - - vvo:131604402 487.648