Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01019 ATGTTTTCACTTCTATTTCTAATTCTTCTATGTTTAATTCTTCCTTTGTTAATGTTCTTCTACAAACATAGAACCACTAAAAATCTTCCACCTGGCCCTAAAGGCCTTCCCATAATAGGGAATCTACATCAACTAGACATTTCTAAACTTTATCTTCAATTATCACAATTCTCAAAAATATATGGTCCTATATTTTCACTTCAACTTGGTTTTAGACAAGCTATTGTTGTTTCTTCAGCTGAAATTGCAAAAGAAGTATTGAAAAACAATGGTCATGTGTTTTCTAATAGACCTATCTTATATGGTCAACAAAAGTTAACTTATAGTGGATCAGAAATGGTGTTTTCTCCTTATGGTGAAGTTTGGAGAGAGCTAAGAAAAATTTCTGCTGTTCATATTTTTAGTTCCAAACGTGTCTCATATTATTCTTCTATAAGAAAATTTGAGGTGAAGAAAATGATCAAGAAAATTTCTGAGCATGCTAGTTCTTCAAGTAATATAAATTTGAGTGAGTTATTGATTTCACTCTCAAGTACGATAATATGTAGAATTGCTTTTGGGAAAAGCTATGAGGATGAAGGACATGAGAGAAGTAGGTTTCATGGATTGTTGCATGAGTTTCAAGCTTTGTTAATGGAAATCTTTGTTGCTGATTATATTCCATTTACGGGTTGGATTGATAAAGTGAGAGGATTGCATGGTCGAGTTGATAGAAATTTCAAGGAGTTTGATGAGTTTTATCAAGAGATTATTGATGAACATTTGGATCCAAATAGAGAACAAATTAAAGATGAAGAGGATATTGTTGATGTCTTACTCAAATTGAAGAAACAAAATTTGTCTTCAATTGATCTCACTTTTGATCACATCAAAGGAGTTCTTGTGGACATGCTTGTAGCTGCAACAGATACTACATCTGCCACATTAGTTTGGACTCTAACTGCCCTAATACGAAATCCAAGAGTAATGAATAAAGTACAAGAGGAAATTAGGAACGTTGGAGGTAAACAAGAATTCTTAGATGAAAATGATATTCAAAATTTTCCTTTTCTGAAGGCAGTGATAAAAGAAACACTAAGATTGTACCTACCAGCTCCACTTCTTGTTCCACGAGAATCAAGAGAAAAATGCGTTATTAGTGGATATAATATTCCGGCCAACACAATATTGTATGTGAATGCTTGGGCTATTCAGAGAGATCCTAATGTTTGGAAAAATCCTGAGGAATTTTACCCGGAAAGATTCTTAGAAAGTTCTATAAATTTTCTTGGACAAAATTTTGAACTAATTCCCTTTGGAGCTGGTCATAGAATTTGTCCCGGAATGCCTATGGCTGTTGCATCAATAGAACTTATCCTTGCCAATCTTCTTTATTCATTTGATTGGAAATTGCCACATGGATTGATAAAAGAAGATATTGATACTGAAATGTTGCCAGGAATCACTCAACACAAGAAGAATCCCCTTTACCTAGTCGCCGAGAGTCCAATATAG 1494 0.3373 MFSLLFLILLCLILPLLMFFYKHRTTKNLPPGPKGLPIIGNLHQLDISKLYLQLSQFSKIYGPIFSLQLGFRQAIVVSSAEIAKEVLKNNGHVFSNRPILYGQQKLTYSGSEMVFSPYGEVWRELRKISAVHIFSSKRVSYYSSIRKFEVKKMIKKISEHASSSSNINLSELLISLSSTIICRIAFGKSYEDEGHERSRFHGLLHEFQALLMEIFVADYIPFTGWIDKVRGLHGRVDRNFKEFDEFYQEIIDEHLDPNREQIKDEEDIVDVLLKLKKQNLSSIDLTFDHIKGVLVDMLVAATDTTSATLVWTLTALIRNPRVMNKVQEEIRNVGGKQEFLDENDIQNFPFLKAVIKETLRLYLPAPLLVPRESREKCVISGYNIPANTILYVNAWAIQRDPNVWKNPEEFYPERFLESSINFLGQNFELIPFGAGHRICPGMPMAVASIELILANLLYSFDWKLPHGLIKEDIDTEMLPGITQHKKNPLYLVAESPI 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01019 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Vivi5g01019 497 CDD CYP71-like 61 489 - -
Vivi5g01019 497 PANTHER CYTOCHROME P450 71B11-RELATED 14 493 - -
Vivi5g01019 497 SUPERFAMILY Cytochrome P450 30 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01019 497 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01019 497 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01019 497 PRINTS P450 superfamily signature 439 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01019 497 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01019 497 FunFam Cytochrome P450 83B1 17 492 - -
Vivi5g01019 497 Gene3D Cytochrome P450 22 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01019 497 Pfam Cytochrome P450 30 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01019 497 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01019 497 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01019 497 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01019 497 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01019 497 PRINTS E-class P450 group I signature 82 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01019 497 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01019 497 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01019 497 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01019 497 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01019 Vivi-Chr5 24880520 24885722 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g01019 5 492 Cytochrome P450 AT4G31500 45.030 3.00e-158 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01019 - - gmx:100801312 674.085