Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01018 ATGAATAAATTACAAGAGGAAATTAGAAACATAGGAGGTAAAAAAGATTTCTTAGACGAAAATGATATTCAAAATTTTCCTTTTTTAAGGGCAGTGATAAAAGAGACACTAAGGTTGTATCTACCCGCTCCACTTCTCGTGCCAAGAGAATCAAATGAAAATTGCATAATTAGTGGGTATAACATTTCAGCGAAGACAATATTGTATGTGAATGCTTGGGTCATTCAGAGAGACTCTAATGTTTGGAAAAATTCAGAGGAGTTTTATCCTGAAAGATTTTTAGAAAGTTCGATAAATTTTCTTGGACAAGATTTTGAACTAATTCCCTTTGGAGCTGGGCATAGAATTTGCCCTGGTTTGTCTTTGGCAGTTGCATCAATAGAACTTATCCTTGCAAATCTTCTTTATTCATTTGATTGGAAATTGCCACATGGGTTGGTAAAAGAAGATATTGATACTGAAATGTTGCCAGGAATCACTCAGCACAAGAAGAATCCCCTTTTCTTAGTTGCCAAGAGCTCAATGTAG 528 0.3504 MNKLQEEIRNIGGKKDFLDENDIQNFPFLRAVIKETLRLYLPAPLLVPRESNENCIISGYNISAKTILYVNAWVIQRDSNVWKNSEEFYPERFLESSINFLGQDFELIPFGAGHRICPGLSLAVASIELILANLLYSFDWKLPHGLVKEDIDTEMLPGITQHKKNPLFLVAKSSM 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01018 175 PANTHER CYTOCHROME P450 71B11-RELATED 1 172 - -
Vivi5g01018 175 Coils Coil 1 21 - -
Vivi5g01018 175 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 110 119 IPR017972 GO:0005506|GO:0016705
Vivi5g01018 175 Gene3D Cytochrome P450 1 171 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01018 175 Pfam Cytochrome P450 2 167 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01018 175 PRINTS E-class P450 group I signature 30 48 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01018 175 PRINTS E-class P450 group I signature 107 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01018 175 PRINTS E-class P450 group I signature 117 140 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01018 175 PRINTS E-class P450 group I signature 71 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01018 175 SUPERFAMILY Cytochrome P450 1 172 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01018 175 PRINTS P450 superfamily signature 31 42 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01018 175 PRINTS P450 superfamily signature 108 117 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01018 175 PRINTS P450 superfamily signature 117 128 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01018 Vivi-Chr5 24826596 24827123 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g01018 1 170 Cytochrome P450 AT2G45570 52.353 3.82e-59 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01018 - - lja:Lj3g3v1475750.1 279.641