Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01016 ATGTTTTCAATTTTAAATCTACTTCTTCTATGTATAATTCTTCCTTTGCTAATATTCTTCCATAAACATAGAACCACTAAAAATCTTCCACCTGGTCCTAAAGGCCTTCCCATAATAGGAAATCTTCATCAACTAGACATTTCTAAACTTTATCTTCAATTATCACAATTCTCAAAAATATATGGTCCTATATTTTCACTTCAACTTGGTTTTAGACAAGCTATTGTTGTTTCTTCAGCTGAAATTGCAAAAGAAGTATTGAAAAACAATGGTCATGTGTGTTCTAATAGACCTATGTTATATGGTCAACAAAAATTAACCTATAATGGATCAGAAATGGTATTTTCTCCTTATGGTGAAGTTTGGAGAGAGCTAAGAAAAATTTCTGCTGTTCATATTTTTAGTTCCAAACGTGTATCATATTATTCTTCTATAAGAAAATTTGAGGTGAAGAAAATGATCAAAAAAATTTCTGAGCATACTAGTTCTTCAAGTAATATAAATTTGAGTGAGTTATTGATTTCACTCTCAAGTACTATAATATGTAGAATTGCTTTTGGGAAAAGCTATGAGGATGAAGGACATGAGAGAAGTAGGTTTCATGGATTGTTGCATGAGTTTCAAGCTTTGCTAGCAGAATTCTTTGTGGCTGATTATATTCCATACATGGGTTGGATTGATAAAGTGAGAGGATTGCATGGTCGAGTTGATAGAAATTTCAAGGAGTTTGATGAATTTTATCAAGAGATTATTGATGAACATTTGGCTCCAAATAGAGAACAAATTAAAGATGAAGAGGATATTGTTGATGTCTTACTCAAATTGAAGAAACAAAATTTGTCTTCAATTGATCTCACTTTTGATCACATCAAAGGAGTCCTTGTGGACATGCTTGTAGCTGCAACAGATACTACATCAGCGACATCTGTTTGGATTTTGACTGCTCTAATAAAAAACCAAAGAGTAATGAATAAATTACAAGAGGAAATTAGAAATATAGGAGGTAAAAAAGATTTCTTAGACGAAAATGATATTCAAAATTTTCCTTTTTTAAGGGCAGTGATAAAAGAGACACTAAGGTTGTACCTACCCGCTCCACTTCTCGTGCCAAGAGAATCAAATGAAAATTGCATAATTAGTGGGTATAACATTCCAGCGAAGACAATATTGTATGTGAATGCTTGGGCCATTCAGAGAGACTCTAAAGTTTGGAAAAATTCAGAGGAGTTTTATCCTGAAAGATTTTTAGAAAGTTCGATAAATTTTCTTGGACAAGATTTTGAACTAATTCCCTTTGGAGCTGGGCATAGAATTTGCCCTGGTTTGTCTTTGGCAGTTGCATCAATAGAACTTATCCTTGCAAATCTTCTTTATTCATTTGATTGGAAATTGCCACATGGGTTGGTAAAAGAAGATATTGATACTGAAATGTTGCCAGGAATCACTCAGCACAAGAAGAATCCCCTTTTCTTAGTTGCCAAGAGCTCAATGTAG 1494 0.3313 MFSILNLLLLCIILPLLIFFHKHRTTKNLPPGPKGLPIIGNLHQLDISKLYLQLSQFSKIYGPIFSLQLGFRQAIVVSSAEIAKEVLKNNGHVCSNRPMLYGQQKLTYNGSEMVFSPYGEVWRELRKISAVHIFSSKRVSYYSSIRKFEVKKMIKKISEHTSSSSNINLSELLISLSSTIICRIAFGKSYEDEGHERSRFHGLLHEFQALLAEFFVADYIPYMGWIDKVRGLHGRVDRNFKEFDEFYQEIIDEHLAPNREQIKDEEDIVDVLLKLKKQNLSSIDLTFDHIKGVLVDMLVAATDTTSATSVWILTALIKNQRVMNKLQEEIRNIGGKKDFLDENDIQNFPFLRAVIKETLRLYLPAPLLVPRESNENCIISGYNIPAKTILYVNAWAIQRDSKVWKNSEEFYPERFLESSINFLGQDFELIPFGAGHRICPGLSLAVASIELILANLLYSFDWKLPHGLVKEDIDTEMLPGITQHKKNPLFLVAKSSM 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01016 497 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01016 497 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01016 497 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01016 497 PRINTS P450 superfamily signature 439 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01016 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Vivi5g01016 497 CDD CYP71-like 61 489 - -
Vivi5g01016 497 PANTHER CYTOCHROME P450 71B11-RELATED 14 493 - -
Vivi5g01016 497 FunFam Cytochrome P450 83B1 17 492 - -
Vivi5g01016 497 PRINTS E-class P450 group I signature 82 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01016 497 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01016 497 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01016 497 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01016 497 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01016 497 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01016 497 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01016 497 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01016 497 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01016 497 Coils Coil 323 343 - -
Vivi5g01016 497 Pfam Cytochrome P450 30 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01016 497 SUPERFAMILY Cytochrome P450 30 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g01016 497 Gene3D Cytochrome P450 22 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01016 Vivi-Chr5 24794570 24798106 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g01016 7 492 Cytochrome P450 AT4G31500 44.512 1.23e-155 451