LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi5g01016	ATGTTTTCAATTTTAAATCTACTTCTTCTATGTATAATTCTTCCTTTGCTAATATTCTTCCATAAACATAGAACCACTAAAAATCTTCCACCTGGTCCTAAAGGCCTTCCCATAATAGGAAATCTTCATCAACTAGACATTTCTAAACTTTATCTTCAATTATCACAATTCTCAAAAATATATGGTCCTATATTTTCACTTCAACTTGGTTTTAGACAAGCTATTGTTGTTTCTTCAGCTGAAATTGCAAAAGAAGTATTGAAAAACAATGGTCATGTGTGTTCTAATAGACCTATGTTATATGGTCAACAAAAATTAACCTATAATGGATCAGAAATGGTATTTTCTCCTTATGGTGAAGTTTGGAGAGAGCTAAGAAAAATTTCTGCTGTTCATATTTTTAGTTCCAAACGTGTATCATATTATTCTTCTATAAGAAAATTTGAGGTGAAGAAAATGATCAAAAAAATTTCTGAGCATACTAGTTCTTCAAGTAATATAAATTTGAGTGAGTTATTGATTTCACTCTCAAGTACTATAATATGTAGAATTGCTTTTGGGAAAAGCTATGAGGATGAAGGACATGAGAGAAGTAGGTTTCATGGATTGTTGCATGAGTTTCAAGCTTTGCTAGCAGAATTCTTTGTGGCTGATTATATTCCATACATGGGTTGGATTGATAAAGTGAGAGGATTGCATGGTCGAGTTGATAGAAATTTCAAGGAGTTTGATGAATTTTATCAAGAGATTATTGATGAACATTTGGCTCCAAATAGAGAACAAATTAAAGATGAAGAGGATATTGTTGATGTCTTACTCAAATTGAAGAAACAAAATTTGTCTTCAATTGATCTCACTTTTGATCACATCAAAGGAGTCCTTGTGGACATGCTTGTAGCTGCAACAGATACTACATCAGCGACATCTGTTTGGATTTTGACTGCTCTAATAAAAAACCAAAGAGTAATGAATAAATTACAAGAGGAAATTAGAAATATAGGAGGTAAAAAAGATTTCTTAGACGAAAATGATATTCAAAATTTTCCTTTTTTAAGGGCAGTGATAAAAGAGACACTAAGGTTGTACCTACCCGCTCCACTTCTCGTGCCAAGAGAATCAAATGAAAATTGCATAATTAGTGGGTATAACATTCCAGCGAAGACAATATTGTATGTGAATGCTTGGGCCATTCAGAGAGACTCTAAAGTTTGGAAAAATTCAGAGGAGTTTTATCCTGAAAGATTTTTAGAAAGTTCGATAAATTTTCTTGGACAAGATTTTGAACTAATTCCCTTTGGAGCTGGGCATAGAATTTGCCCTGGTTTGTCTTTGGCAGTTGCATCAATAGAACTTATCCTTGCAAATCTTCTTTATTCATTTGATTGGAAATTGCCACATGGGTTGGTAAAAGAAGATATTGATACTGAAATGTTGCCAGGAATCACTCAGCACAAGAAGAATCCCCTTTTCTTAGTTGCCAAGAGCTCAATGTAG	1494	0.3313	MFSILNLLLLCIILPLLIFFHKHRTTKNLPPGPKGLPIIGNLHQLDISKLYLQLSQFSKIYGPIFSLQLGFRQAIVVSSAEIAKEVLKNNGHVCSNRPMLYGQQKLTYNGSEMVFSPYGEVWRELRKISAVHIFSSKRVSYYSSIRKFEVKKMIKKISEHTSSSSNINLSELLISLSSTIICRIAFGKSYEDEGHERSRFHGLLHEFQALLAEFFVADYIPYMGWIDKVRGLHGRVDRNFKEFDEFYQEIIDEHLAPNREQIKDEEDIVDVLLKLKKQNLSSIDLTFDHIKGVLVDMLVAATDTTSATSVWILTALIKNQRVMNKLQEEIRNIGGKKDFLDENDIQNFPFLRAVIKETLRLYLPAPLLVPRESNENCIISGYNIPAKTILYVNAWAIQRDSKVWKNSEEFYPERFLESSINFLGQDFELIPFGAGHRICPGLSLAVASIELILANLLYSFDWKLPHGLVKEDIDTEMLPGITQHKKNPLFLVAKSSM	497

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi5g01016	497	PRINTS	P450 superfamily signature	300	317	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vivi5g01016	497	PRINTS	P450 superfamily signature	353	364	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vivi5g01016	497	PRINTS	P450 superfamily signature	430	439	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vivi5g01016	497	PRINTS	P450 superfamily signature	439	450	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vivi5g01016	497	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	432	441	IPR017972	GO:0005506\|GO:0016705
	Vivi5g01016	497	CDD	CYP71-like	61	489	-	-
	Vivi5g01016	497	PANTHER	CYTOCHROME P450 71B11-RELATED	14	493	-	-
	Vivi5g01016	497	FunFam	Cytochrome P450 83B1	17	492	-	-
	Vivi5g01016	497	PRINTS	E-class P450 group I signature	82	103	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vivi5g01016	497	PRINTS	E-class P450 group I signature	176	194	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi5g01016	Vivi-Chr5	24794570	24798106	Dispersed/Proximal

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi5g01016	7	492	Cytochrome P450	AT4G31500	44.512	1.23e-155	451

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi5g01016	-		-	lja:Lj3g3v1475790.2	664.84

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