LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi5g01003	ATGGAGAGTTCCGGTGTGGATCCTCCTTTGATGAAATGCGACGTAAATCAGACATGCGTGGATACAACATATGATTTTGTAACTGGTCAAAAATTTACTACAAGAGAAGAGGCGATAAGTTGGATTAGGGAGGTTGGAATCAGGAATAAAGTGACAGTTATAATAACTCATTCAGATACTAAAACAGGCAAGAGAGGAAGAAGTAACAAATTAATATTTGGTTGTGATAAAGGTGGAAAATACAAAAAAACAGATAGTGAAACCCAAAGTGCTAGTAAGAGATGTGGTTGTCCTTTCAAAATTAGGTCAAAACCGTCGAAAGATGGTTCTGGATGGAAGATCGATGTAAAATGCGGAGTACACAACCACGACTTACCTGATAGATTTGAAGGTCATGCTTTCGTAAGTCTATTAAATACAGATGATAAGCAACATATTGTTGATTTGATAAAATGCCATGTTCCACCAAGACACATATTATTGTCAATGCAAGAGCGTGACCCGGAGAATGTCACTCGGATCACACAAATATACAAACATAAGAGTAAGATACAAAAAGACATAAGGGGTCCCATAATAGAAATGCAACAATTGCTCAAGTTGGTTAAAGAATCAGGTTATGTTTACTGGAGCAGGAAAAAGGATGAGTCAGAAGTTGATTTTTGTCCTCAAGTAATCTTGACTGATAGAGATCTTGCTTTAATGAAAGCCATTGAAACAGTATTTCCAAAGACAACTAATTTGCTTTGCCAATTTCACATCAACAAAAATGTGAAATCAAAGTGTAAGGAGTATGTTGTGGATAATATGCGAGAAACTGTGGAGAAAATGTGGTATGAACTTATAAGGGCTAGTGATGAGATGGAGTACCATCAAAGATTGAAACAATTTGAGGATGCATGTGTTGACTCCAAAGATTTTATTGACATGGTAGGTACAGATACGCAAAAGTGCGGATGTACTCATAGAAAAGTATATGGGTTACCATGTGCTTGTGAGTTAGGGAGATATACATTGAGTGGTGATGCGATACCAATTAGGCTATTCATATTCATTGGAGAAAACTAA	1068	0.3652	MESSGVDPPLMKCDVNQTCVDTTYDFVTGQKFTTREEAISWIREVGIRNKVTVIITHSDTKTGKRGRSNKLIFGCDKGGKYKKTDSETQSASKRCGCPFKIRSKPSKDGSGWKIDVKCGVHNHDLPDRFEGHAFVSLLNTDDKQHIVDLIKCHVPPRHILLSMQERDPENVTRITQIYKHKSKIQKDIRGPIIEMQQLLKLVKESGYVYWSRKKDESEVDFCPQVILTDRDLALMKAIETVFPKTTNLLCQFHINKNVKSKCKEYVVDNMRETVEKMWYELIRASDEMEYHQRLKQFEDACVDSKDFIDMVGTDTQKCGCTHRKVYGLPCACELGRYTLSGDAIPIRLFIFIGEN	355

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi5g01003	355	Pfam	MULE transposase domain	221	257	IPR018289	-
	Vivi5g01003	355	PANTHER	PROTEIN FAR1-RELATED SEQUENCE 10-RELATED	17	287	IPR031052	GO:0006355

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi5g01003	Vivi-Chr5	24029433	24030921	Dispersed/Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Vivi5g01003		MULE	1.5e-08	CL0219

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi5g01003	-		-	vvo:131613742	558.91