Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00995 ATGGAATTCATTGGTGAAATTGAAGAGCCTGTTATTAGTGAGAATGCCAACAATGATTCATATGCTAGTGATTTAGAGGCTAATAATTTTCAAGAACCTTGCTTGGAAATGGAATTTGAGTCACAAGAAAATGCTTATTCTTTTTATGTTCAGTATGCTAAATGTGTTGGATTTGGTGTTTCCATCAAAAGTAGTCGCCGTTCAAAGATTTCTAGACAATTTATTGATGTCAAATATGCTTGCACAAGATATGGAAATAAACGAGAGTCGACTTCCCAAAATCCACGGCCTTGTTTGAAGGTGGATTGTAAGGCTGGCTTGCATATTAAAAGAAGATGTGATGGAAAGTGGGTTATCCATGGCTTCATTAAAGATCATAATCATGAACTTTTCCCAACATATGCACATTATTTTCCTTGTCATAGAAGCATCAATAAAGCTCAAAAGCAATGTATTGATACTTTGCAACATGTTGGAGTGAGAACAAATAAAATTTATGCCACAATGGCCAAACAACACGGAGGATATGAAAAAGTTGGTTGTTTGGAGAAAGATGTTAGAAATCATTTGGATAAGGAACGTCGTCTGAATTTAGAATCAGGAGATGCAAATGCAATGTTGGAGTGTTTTATGCTTATGCAAGAAGAAAATCCAAGATTTTTTTATGCATTTGATTTGGATGATGATGGTCGTGTAAAAAATGTATTTTGGGTGGATGCAAATGGTAGAGATGACTATCAAGAATTTGGAGATGTGATTTCATTTGATACCACATATATCACAAACAAATACAAAATGCCATTTGCTCCATTCATTGGTGTGAATAATCACTTTCAATCAAGACTCCTTGGTTGTGCATTACTAGCAAATGAGTCATCTGAGAGTTTCATATGGTTGATGAAAATATGGCTTAGGGCAATGGGCGGCAAACCTCCAAATGCAATAATAACCGATCAAGATAAAGCAATGAAAGTGGCCATTGAAGAGGTATTTCCAAACACTCGACATCGGTTTTGTTTGTGGCATATACTTAGAAAGGTGCCCGAGAAGTTAAGCCATGTAATGAGAAAAAATGAAGATTTCACCCGTGATTTTAACGCATGTATTTACAAGTCTCGGTCAATACAACAATTTGAAGATAAATGGAAAGAAATGGTAGAGAAATTTCAACTGTCAGAGGATGGGTGGATTCGATCTTTGTATGGAGAACGTGGACATTGGGTTCCTGTTTACATGAAAGATACATTTTTTGGTGGCTTGTCAACGACTCAAAGATCAGAGAGCATTAACTCTTTTTTCGACAAATATGTTGTCATACCCTAA 1323 0.3583 MEFIGEIEEPVISENANNDSYASDLEANNFQEPCLEMEFESQENAYSFYVQYAKCVGFGVSIKSSRRSKISRQFIDVKYACTRYGNKRESTSQNPRPCLKVDCKAGLHIKRRCDGKWVIHGFIKDHNHELFPTYAHYFPCHRSINKAQKQCIDTLQHVGVRTNKIYATMAKQHGGYEKVGCLEKDVRNHLDKERRLNLESGDANAMLECFMLMQEENPRFFYAFDLDDDGRVKNVFWVDANGRDDYQEFGDVISFDTTYITNKYKMPFAPFIGVNNHFQSRLLGCALLANESSESFIWLMKIWLRAMGGKPPNAIITDQDKAMKVAIEEVFPNTRHRFCLWHILRKVPEKLSHVMRKNEDFTRDFNACIYKSRSIQQFEDKWKEMVEKFQLSEDGWIRSLYGERGHWVPVYMKDTFFGGLSTTQRSESINSFFDKYVVIP 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00995 440 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 18 437 IPR031052 GO:0006355
Vivi5g00995 440 Pfam MULE transposase domain 252 345 IPR018289 -
Vivi5g00995 440 Pfam FAR1 DNA-binding domain 47 132 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00995 Vivi-Chr5 23706634 23708803 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi5g00995 MULE 2.9e-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00995 - - vvo:131604373 917.146