Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00979 ATGAACCCAACAAATCTTCTCCTTCTTTCATCTCAAAACTTGAAAGAATGTACAAACAATTTCAACCAAATCAATCTCATAGGGTTGACACAGTTTGTAAGATTGTTTAGAGGAAACTTCCAAGGTCAACATGTCTTAGTGAAGATATTGGATGATGAAAAATTGAAGCACATAACTTCCAAATATCATGATGAAAATTTGATTCTCAAAGAGGAAATAAAGTTTTACACAAATCCAAATTTGAAAGATTGTCCTAACTTGGCTACTTTGATTGGTTATACTTGGGAAAGAGATATAAAAGGGATTGTTTATGATATTAATCCACTTGATACTTTGGATAATGTAATCAAGAAAGATGGTATGAATTGGGTTCAGAGAATAAATGTAATTCATGAGATTGCTAAGTTCTTGAAATTCATACATGATCAAGAGAAACAAAACATGGTGATGAATAATGCATCTCATATAATTCTTGATAAGGACTATAAGCCAAAGTTATTTGATTTGATGTTGCTTAGTGAAGTAAAAATGCTAAAGGAACAATTAACAATGTCAACTAGCTATATTGATCCTTATTTTTCTCTAAGAGGTGGTGAATGGAATAAAAGCAGTGAAGTGTATTCATTTGGCATTATTTTGCTAGAACTAATAACCAAAAGAATTTCAAACAATGAAAACATAGAACACACAAGCTTAAACATGGATAATCTATTGCATATTTGGGCCAAGAAAGAGTACAAGCCAAATTGTTCTCTTGTTCACAAACATTTGCAAGAAGATTGGCTCTATAATGCCAAAGATGGTGTTGCAATAACTCTACTTGCTTTGCAGTGCATAGAATTTTTTCCAGCAAATCGTCCATCAATGAGTGATGTGTTGCAAAATCTGGAAAATCTTTCAGTGTTGCAACATTTGTTTGATGCTAGATCAAGTAAAAGGGAAAAGAAGTTCATTTCATCATGA 963 0.3188 MNPTNLLLLSSQNLKECTNNFNQINLIGLTQFVRLFRGNFQGQHVLVKILDDEKLKHITSKYHDENLILKEEIKFYTNPNLKDCPNLATLIGYTWERDIKGIVYDINPLDTLDNVIKKDGMNWVQRINVIHEIAKFLKFIHDQEKQNMVMNNASHIILDKDYKPKLFDLMLLSEVKMLKEQLTMSTSYIDPYFSLRGGEWNKSSEVYSFGIILLELITKRISNNENIEHTSLNMDNLLHIWAKKEYKPNCSLVHKHLQEDWLYNAKDGVAITLLALQCIEFFPANRPSMSDVLQNLENLSVLQHLFDARSSKREKKFISS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00979 320 PANTHER OS01G0588500 PROTEIN-RELATED 5 299 - -
Vivi5g00979 320 Gene3D Transferase(Phosphotransferase) domain 1 109 316 - -
Vivi5g00979 320 Gene3D Phosphorylase Kinase; domain 1 2 105 - -
Vivi5g00979 320 SMART serkin_6 21 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g00979 320 ProSiteProfiles Protein kinase domain profile. 21 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g00979 320 Pfam Protein kinase domain 40 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g00979 320 SUPERFAMILY Protein kinase-like (PK-like) 6 297 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00979 Vivi-Chr5 23200179 23203173 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00979 12 305 Receptor kinase-like Gene Family AT4G23320 26.384 6.41e-28 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Vivi5g00979 Pkinase 1.9e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00979 - - gmx:102662076 479.174