Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00968 ATGGTGCATCCGGACAACATTGTGCAAGACGATGGAGTATTAAATCCGGAAATTGTCAACGTTAATAACGATCCGGTTATTGACGCTACTCCTATGATCAATGCGGTCGATGTTAGGCAACATTTTACAAATGATCGGAGCTTCGTTAGTCGAGAACAATTGATTGATTGGGTTCGAAACGAAGCTAGTAAACTTGGATTTGGAATTGTCATTTTAAGGTCGGACAACGGAAATAGTAGGCGGAAAGCTTTCGTTGTTTTGAATTGCGAACGTGGTGGTAGTTATGTGCAATCAAACCGTGTGCTAAAACACGAGGACACGGGATCGAGAAAGTGCGGGTGTCCGTTTAAGTTGCGTGCCACTCGGAGGGTTGATGATTTGTGGCGGTTAACCGTAATTTGTGGAATGCATAATCATGCCTTGGATGTCAAGTTACACGGGCATCCAATGGCGTGTCGTTTGTCCCGCGAAGAGAGGAATGTGATATCGGACCTAACGATAGTCAAAGTGGCGCCTCGCAACATACTTGCCGATTTGAAGCGTAAGAAACCGGATAGCGTTTCAAATATCAAGCAAGTTTACAATGAACGGCACAATCTCAAGGTTTTGAATATGGGCCCTCGGTCGGAAATGCAACAACTTTTGAAACTTCTAGGCGATAACAATTACGTTTCAAGCTTCCGAACCTCCGAGGACAAAGTTACCGTGCGTGATATTTTTTGGACTCATCCCGAAAGTATCAAATTGTTCAACACATTTCCAACCGTTCTAGTCATGGATTCGACGTACAAGACAAACAAGTATAGGCTTCCTCTTCTAGAGATCGTCGGTGTGACCTCGACGGACAAGACTTATTCGGTGGGGTTTGCTTTTTTGGAGTGTGAAAAAGAAGAAAACTTTACGTGGGCCTTGGGAATTTGCAAGTCTTTGTTAGTTGATCAAGAGGTTATGCCAAACGTCGTTGTCACCGATCGGGACAATGCTTTGATGAATGTGTTTGTTGTGTTTGAGAAGCAACAAAGTTTTCCATCATTATCTCAAGATTTGACTTTCGGGGTGCTTGAGGTGCGGCTTGATTTGGCTTTTGAAAACTGTGAGGTGTTTGGGTAG 1110 0.4378 MVHPDNIVQDDGVLNPEIVNVNNDPVIDATPMINAVDVRQHFTNDRSFVSREQLIDWVRNEASKLGFGIVILRSDNGNSRRKAFVVLNCERGGSYVQSNRVLKHEDTGSRKCGCPFKLRATRRVDDLWRLTVICGMHNHALDVKLHGHPMACRLSREERNVISDLTIVKVAPRNILADLKRKKPDSVSNIKQVYNERHNLKVLNMGPRSEMQQLLKLLGDNNYVSSFRTSEDKVTVRDIFWTHPESIKLFNTFPTVLVMDSTYKTNKYRLPLLEIVGVTSTDKTYSVGFAFLECEKEENFTWALGICKSLLVDQEVMPNVVVTDRDNALMNVFVVFEKQQSFPSLSQDLTFGVLEVRLDLAFENCEVFG 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00968 369 Pfam FAR1 DNA-binding domain 62 141 IPR004330 -
Vivi5g00968 369 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 38 332 IPR031052 GO:0006355
Vivi5g00968 369 Pfam MULE transposase domain 256 333 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00968 Vivi-Chr5 22708706 22713006 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi5g00968 MULE 1.6e-17 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00968 - - vvo:131620442 654.44