Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00915 ATGAGGAGGAATAACAAGTTCAAGCTTTCAAATATGATTCCCAATGCTTGGTTTTACAAGCTAAAGGAAATAGGCAAACCAAAAAACCAAACATCAACAACCTCAAAGAACAACAAAAAACCCTCAAAAACATCCTCAATTTCCTCAAAACCAAATCCACCCAACCAAAACCAAAACCAATACATTCCTAGAAAATCTTACTACTTCACAAGAAACCTTAACCAAAACAAATTACCTTCTTCTTCATCACCAAAAACACCCTCCAAAAACAGAACAACAAGAAAAACATGTTCTTCTTCACCAAAACTTGTCACCTCCTCCGTCTCCGCGGATTGTAGCTGTCGAACCACACTCGAATCCGTGTGGACGAAATCCGAAACACTTTCTTCGTCTCCGTTATATGAGTCAGAATCCGTTGACACCGAGTTCAGAACAGACAGAGTTCTACTTCCCAATGAAACATCATTCGATGAAATGGTTTCTTTGTCCATTTCTTCTTGTCCTTGCACCAACAAAACATCCTCAAACAATAACAATATCAACAACAACAACAACAACATAGATATTGTTATCGATGTTGACAAGAATTCCCTACCTAGAAAAGATGATAAACTTGAACAAGACTACAATTCTTATGTTTCTTTCTCAAACCTACAACTTCCTCCAATCATCACAAAACCACAAATCAAAAAACAACACAAACCCGAAAAACATCATCAACCACAACAACAACAAGAAACAATGAAGAACAAGAACACCACGAACACAAACACGAACAAGAAAAGAAACAAAAACAAAAACAAGACAGGTTCTATAAATTCTCCGGGGATGAAGCTGCGTATAAAATCTCCGAAAATCGCAACAAAGAAACTTCAATTATATCACAGCCGGAAAAGCGTGTCGTCTGCTACGACGACAGCTTCCGGCGGGTACTACCGGAGAAGAAGCTTCTCCGGTAGTGTGGCGATAGTGAAGTCATCTTTTAATCCTCAGAAGGATTTTAGAGAGTCAATGGTGGAGATGATTGTGGAGAATAACATAAGAGAATCAAAGGATTTGGAAGATCTTCTTGCTTGTTATCTTTCTTTGAATTCAGATGAGTATCATCAGCTTATTATCAAGGTGTTCAAGCAAATATGGTTTGATTTGACTGAAAACAGGGTAGACAAATATAACTAG 1179 0.3774 MRRNNKFKLSNMIPNAWFYKLKEIGKPKNQTSTTSKNNKKPSKTSSISSKPNPPNQNQNQYIPRKSYYFTRNLNQNKLPSSSSPKTPSKNRTTRKTCSSSPKLVTSSVSADCSCRTTLESVWTKSETLSSSPLYESESVDTEFRTDRVLLPNETSFDEMVSLSISSCPCTNKTSSNNNNINNNNNNIDIVIDVDKNSLPRKDDKLEQDYNSYVSFSNLQLPPIITKPQIKKQHKPEKHHQPQQQQETMKNKNTTNTNTNKKRNKNKNKTGSINSPGMKLRIKSPKIATKKLQLYHSRKSVSSATTTASGGYYRRRSFSGSVAIVKSSFNPQKDFRESMVEMIVENNIRESKDLEDLLACYLSLNSDEYHQLIIKVFKQIWFDLTENRVDKYN 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00915 392 NCBIfam uncharacterized plant-specific domain TIGR01568 321 384 IPR006458 -
Vivi5g00915 392 MobiDBLite consensus disorder prediction 74 101 - -
Vivi5g00915 392 MobiDBLite consensus disorder prediction 245 260 - -
Vivi5g00915 392 MobiDBLite consensus disorder prediction 229 277 - -
Vivi5g00915 392 Pfam Transcriptional repressor, ovate 327 383 IPR006458 -
Vivi5g00915 392 ProSiteProfiles OVATE domain profile. 323 382 IPR006458 -
Vivi5g00915 392 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 107 385 IPR038933 GO:0045892
Vivi5g00915 392 MobiDBLite consensus disorder prediction 26 61 - -
Vivi5g00915 392 Pfam DNA-binding domain 3 42 IPR025830 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00915 Vivi-Chr5 19366660 19368108 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vivi5g00915 Ovate 1.9e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00915 - - cam:101506553 346.28