Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00886 ATGACTACAATTTCAATCGGCAGTTTGGAGTCGAACAAAGATGATGAACCGACACTTGATACTTCACAAGATGCTCATATACCTGAATCAGTTGAGACAAATCATGAGGTTCTATATTGTGATGAAGAAATAAAGCCTAAGGTTGGACAAATTTTTGATTCACTCGAAGATGGTGAATTTTTTTACAAAAGATATGCACATAGTGTTGGTTTTAGTGTGCGTTGTTCATCGGAAAATAAAAATAAAGATGGTGTCATACGTTGGAAGTACTTTGTTTGCTCTAAAGAGGGTTACAAACCAAATGTATCAAAAGAGAACGAAGTGAGTGAATTGGGAGTTAAAGTCAAGAGGAGGAGTCTTACTAGAGAAGGATGTGATGCAAAAGTTGCTTTCAAGTTGTTAGAGGGAGGAAAATATGAGCTAACTCGATTTCAAGAGAGTCATACACATGCACTTGCCTCACCTAAAAAGAGACAATTTCTTAGATCTGCAAGAAAAGTGAATAATATTCATAAGAGTATAATGTTTGCAAATAGTAGAGCAAATATTGGTCCTTCAAAAACATACCATTTGTTGAAGGAACAACTAGGTGGTTATGAAAATATTGGGTGCACACAGAGAGATCTACAAAATTCGTTTAGAGATTTAAAGACCTTAATCAAAGATTCAGATGCATATGTCTTCATTGATAACTTTAAAAGGAAGCAAGAAGTGAATCCCTCGTTTTATTTTGCATACGAGGTTGATGTTGAAGATCGACTGAAACACGTTTTCTGGGCAGATGGAATTTGTAGAAAAAATTACTTCTTATTTGGAGATGTAATGTCGTTCAACACTACATATGAAACAAATAAATATTCCATGATATTTGCACCATTTACTGGAGTGAACCATCATAGACAGTCTGTTACTTTTGGAGCTGCCTTCTTAGCAAATGAGAAAGCTGATTCATTCATTTGGTTATTTGAAAAGTTTTTGGAAGCTATGGGGGGGAATAAACCAAATCTTATAATAACAGATCAAGACCCTGCCATGAAAATTGCAATTGAGAAGGTCTTTGATTCTTCTGCACATAGGTTTTGTATGTGGCACATCATGAAAAAAGTTTCTGAAAAGGTGGGTGTTTCCTTGAATTCTAATGAGGAGTTCAATAATAAATTTAAGTCATGTGTTTGGGGATCAGACACTTCTGAAAATTTTGAAGCATCATGGAAATCCATCATGATTGAGTTTGGATTGCAAAAGAATGAATGGTTGTCACACATGTATAATATTCGAAATATGTGGATCCCGGCTTACTTCAGAGATATATTTTTGGCTGGCGTATTGAGAACAACCTCAAGATCAGAGAGTGAAAATTCCTTCTATGGTAACTTTTTAAATCCTACTATTGGCTTGGTAGAGTTTTGGATGAGATTTGAGTCTGCTATAGAAGCTCAAAGGCATAAAGAGTTACTTGCTGATAATACTTCACTTCATTCTTTACCAATACTAAAATTAGACCGTGGATTAGAGAGGCATGGTAGGGATATTTACACTCGTGAAAACTTTTATATATTTCAAAATGAATTATGGATTGGATGTATAGACTGCGGAGTAGAAAATATAAATCAAAATGATGGTGTGGATGTTTTACACATAATTGATAATAGTGTGACAAATGGTAAAGTAGACGAGGTGGTTTATAATGTTTCTGATTATAGCTCGACTTGTTCGTGCAATATGTTTCAATCACAAGGCATACCATGTAGACACATACTCTGTGTTTTAAGAGGAAAAGGTTTAAATGAAATACCGAACAAGTATATTCTAAATAGATGGACCAAAATGGCGACCAACAAGTCTGTTTTTAATGTTGATGGAAAGGACTTAGAAGGTTTGTCCGAAACAAAAAATGAGAGACAACTCATTTCAGAGGTATGGGATCATTTATATATGTGCATGCATATGGCTGGGCAGTGTAAGGAGAAGTTGCTTCTTATAACAAATGGATTTGCTAACATTAAAAAACAATTATCTGAATTTGAAGATGATTCTTTACCCACCAAAACAAATGAGCTAGAGTCTTTTATTGGTTTTGATCTTTCTAAAGAAGTGAAAATTCATCCCCCACAAATTTCAAAGACAAAAGGAAGTGGTAAACGAATTAAAGGAGGAAAAGAGAAGGCTATTGAACAACAACAGAAAAGATCCAGACTTTGTAAAGCATGTGGCCAATATGCATCTCATGACACTCGTAATTGTCCATCGAAATCATCTCCTTAA 2265 0.3475 MTTISIGSLESNKDDEPTLDTSQDAHIPESVETNHEVLYCDEEIKPKVGQIFDSLEDGEFFYKRYAHSVGFSVRCSSENKNKDGVIRWKYFVCSKEGYKPNVSKENEVSELGVKVKRRSLTREGCDAKVAFKLLEGGKYELTRFQESHTHALASPKKRQFLRSARKVNNIHKSIMFANSRANIGPSKTYHLLKEQLGGYENIGCTQRDLQNSFRDLKTLIKDSDAYVFIDNFKRKQEVNPSFYFAYEVDVEDRLKHVFWADGICRKNYFLFGDVMSFNTTYETNKYSMIFAPFTGVNHHRQSVTFGAAFLANEKADSFIWLFEKFLEAMGGNKPNLIITDQDPAMKIAIEKVFDSSAHRFCMWHIMKKVSEKVGVSLNSNEEFNNKFKSCVWGSDTSENFEASWKSIMIEFGLQKNEWLSHMYNIRNMWIPAYFRDIFLAGVLRTTSRSESENSFYGNFLNPTIGLVEFWMRFESAIEAQRHKELLADNTSLHSLPILKLDRGLERHGRDIYTRENFYIFQNELWIGCIDCGVENINQNDGVDVLHIIDNSVTNGKVDEVVYNVSDYSSTCSCNMFQSQGIPCRHILCVLRGKGLNEIPNKYILNRWTKMATNKSVFNVDGKDLEGLSETKNERQLISEVWDHLYMCMHMAGQCKEKLLLITNGFANIKKQLSEFEDDSLPTKTNELESFIGFDLSKEVKIHPPQISKTKGSGKRIKGGKEKAIEQQQKRSRLCKACGQYASHDTRNCPSKSSP 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00886 754 MobiDBLite consensus disorder prediction 1 27 - -
Vivi5g00886 754 Pfam MULE transposase domain 274 368 IPR018289 -
Vivi5g00886 754 SMART 26again6 569 596 IPR006564 GO:0008270
Vivi5g00886 754 MobiDBLite consensus disorder prediction 704 723 - -
Vivi5g00886 754 ProSiteProfiles Zinc finger SWIM-type profile. 562 594 IPR007527 GO:0008270
Vivi5g00886 754 Pfam FAR1 DNA-binding domain 61 153 IPR004330 -
Vivi5g00886 754 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 41 635 IPR031052 GO:0006355
Vivi5g00886 754 Pfam SWIM zinc finger 564 590 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00886 Vivi-Chr5 17289861 17292423 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi5g00886 MULE 3e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00886 - - mtr:112420857 1051.58