Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00866 ATGATACTGATACTACTAATCCAACAAGGAAGAGGAATAGTGCTTACAACTACATATCAAGAAAAACCATTATCAGAGTCTTCACTGAATATAATTGGAGAGTGCGAAATAGCAATAGTCATGTTTTCAAAGAGTTATACTAACTCAAGGTTGTGTCTTCAAGAATTGGAAGAGATAACCAAATATTGTCGTACCACACCTGGTCTTATTATTCTGCCTTTTCTCGTAAACATGGAAGAAGGTATGTATGGAAGGGCGTTTCATGATTTTTTGGATAGAGTATGGATAGAGGAAATCTCCAAAGAGGAAGACAAGTTCATGAGTTGGCTAGCAGCGTTCAATAAAGCTACCAAACACTCTACTAGATTACTATATTTCAAAGAAAGTTTCAAAGAAAGTTTCCAAGAAAGTTTCAGGAATGAAAGTGAATATATTAAGGAGGTAGTTGAACATGTTACTGCTGTGCTAAACAAGAGAGACGTGTCCAGTTTTTTTTATGGAGAGAGAATAAATTCTTGCACACAAGATGTGATTCAACTATTGAAACAATCAAATCATCCTCTCCTACTAGGGATATGGGGGATGGAAGGGATTGGTAAAACGACCATTGCCCGAACTATTTATGATCTGATTGGTCCTTATTTTGAGCACAAGATCTTTGTCAAAGATATCAGGGGAGTTTGGGAACAAAGGAATGGTTATTATTTTTTGCAAAAGAAAATTTCTGCTATGGACAGATTATTAGAAACAAAGATAAAAATATCTATTACAATGGAATCAGGAAAAGTGTCTATAAAAGAAAAGCTTCAACATAAAAGGGTACTTATTATACTCGATGGTGTTTATAAATTGGAGCAGCTAAATGTTGTGTCTGGAAGTCGTGAATGGTTTGGTCCAGGTAGCAAAATAATCATCACGACAAGAGATAGGCATCTACTTAAGGAGCACGGAGTTGACCATATATACAAAGTGAAAGAATTGGACGAAAGTGAATCGTTTGAGCTTTTTAATTTAAATGCATTCAGAGAAACAACAACTCCTCGAGGGGATTTTGGAGAACTTTGCAGACAGGTAGTTGCCTATTCTGGGGGATTGCCTCCTGCTCTTGAAGAGCTTGGGTCCTTTTTGAATGGAAAGGGAGTACATGAGTGGAAGGGTGTGTTGAGGAGTCTCGAAAGACTTTCCATTCCAGTTCCACAACTACTAAAAGCTCTTGAAAAGAGTTTTAATGATTTGAGTGATGAAGAGAAACAAATATTCTTTGATATAGCATGTTTCTTTAATGGGATGGACCAAAATGATGTGCTCCAAACATTATCCAAGTCAACACAATATGCAACTCTTCAAATAAGCCTCCTTGAAGACAAAAGCCTTGTAACCATTGACGAGAATAACAAGCTTCAAATGCATGTTATGCTACAAGCCATGGCAAGAGATGTCATTAAGAGGAAATCTAGAAATGTGCCTGATCAGCAAAAGAGGTACGACGTGTTCTTGAGTTTTAGAGGGAACGACAGTCGTGTGAAATTCATTTCACATCTGCATTCCTCTCTCCAAAATGCGGGGATTCATGTTTTCAAAGACGATGATGAGATTCAACGAGGAGATCAGATCTCAACATCACTGTTGCGAGGAATTGGAAGGTCTAGAATATCTATAGTTGTTTTGTCTGAAAATTATGCTAATTCAAGATGGTGTATGGTAGAGTTGGAGAAGATCATGGAAATTGGCAAAAGCAAGGGTCTGGTGGTTGTGCCAGTGTTCTATGAGGTGGATCCCTCAGATGTACGTCATCAAGAAGGTCAGTTTGGGAAAGGTTTTGATGATCTTATATCAACAATCTCATTGGATGAATCCACAAAGAGTAATTGGAGAAGAGAACTCTTTGATATTTGTGGCATAGCAGGGTTTGTCCTCCTTGATTCCAGGAATGAAAGTGCTGATGTCAAGAATATTGTTAGACATGTTACTCATTTGCTAGATAGGACACAATTATTCGTTGCTGAACATCCAGTGGGAGTAGAATCTCGGGTGCAAGCTGCAACTAAGCTATTAAACATTGAAAAATCAGAAGATGTTTTACTTCTAGGGATATGGGGAATGGGGGGTATGGGCAAAACAACCATTGCCAAAGCAATTTTTAATGAAATTGGGAGCAAATTTGAGGGAAGGAGCTTCCTTCTGAATATAAGGGAATTTTGGGAGACAAATACTGATAGAGTTTCACTACAGCAACAGGTGCTTTGTGATGTTTACAAAACAACAACATTCAAGATAAGTGACATCGAGTCAGGGAAAAATATGTTAAAGCAAAGACTCTCCCAGAATAGGGTGCTTTTTGTGCTTGATGATGTAAATGAATTGGACCAAATAAAGGCTTTGTGTGGAAGCCACAAATGGTTTGGTCCGGGGAGTAGAATAATCATCACTACAAGAGACTTGCATCTTCTTAATTTGTGTAGAGTTGATAATGTGTATAAATTAGAAGAAATGGGCGAAAGTGAATCTCTTGAGCTTTTCAGTTGGCATGCATTCAAGCAACCAAGTCCAGCAGAGGATTTTGCTACACATTCAACAAATGTGATTGCTTATTCTGGGAGATTGCCACTGGCACTTGAAGTTCTTGGATCCTATTTGTCTGACTGTGAAATAACAGAGTGGCAGAAAGTTTTGGAGAAACTCAAATGTATTCCACATGATCAAGTACAGAAGAAGCTAAAAATAAGCTTCGATGGTTTAAAAGATGTTACAGAGAAACAAATATTCCTTGATGTAGCCTGTTTCTTTATTGGGATGGATAAAAATGATGTAATACAAATATTAAATGGGTGTGGGTTTTTTGCTGATATTGGAATCAAAGTCCTTGTAGAGCGAAGCCTTGTAACTGTTGACAATAGGAACAAGCTTAGAACGCATGATTTGTTGAGAGACATGGGAAGACAAATAATATATGAGGAATCGCCATTTGATCCTGAGGACCGTAGTAGGGTGTGGCGCCGTAATGAAGTGTTTGATATATTATTAAAGCAGAAGGGAACAAAAGCTTTCAAGGGACTGGCTTTAGAGTTTCCAAAACAAGATATAGTTTGTCTGAATACCAAAGCATTTGAGAAGATGAATAAACTCAGATTGCTTCAACTTGCTGGGGTGCAGCTTAATGGAGATTTTAAATATCTTTCAGGAGAACTTAGGTGGTTGTGCTGGCGTGGATTTCCATCAACTTACACTCCTGCAGAATTTCAACAAGGAAGTCTAGTTGTCATCAAATTAAAACATAGCAATCTCAAACAGATATGGAAAGAGAGCCTGATGCTAGAGAATCTAAAAATTCTTAATCTTAGTCATTCTCATGATTTGACTGAAACCCCAGACTTTTCATACTTGCCTAATCTTGAAAAGCTAGTACTCAAAGACTGTCCAAGGTTGTCTATGGTCTCCCATAGCATTGGATCTCTCCAGAAACTTCTTCTGATAAATTTGACAGATTGCACAGGTCTTCGAAAACTTCCGAGAAGCATCTATAAATTAAAATCTCTCGAAACTTTGATTCTTTCAGGATGTTCCATGATTGACGAATTGGAGGAGGACTTGGAACAAATGGAATCATTGACAACCTTGATCGCAGATAAGACTGCTATAACAAAAGTGCCCTTTTCAATAGTAAGATCCAAAAGCATTGGATTTATTTCTTTATGCGGCTTTGAAGGATTTTCCCGTGATGTATTTCCTTCACTTATTTGGTCTTGGATCTCACCAACAAACAATGTGCTATCCCTAGGTCAAACATCAGCATCCATGTCATCTCTTAGAAGTCTTAGTTTGGAGTGTGGCTCAGATCTAGAACTAACTCAAGTTGTAGCAAGAATTTTGGATGTATTAAAAGGCAAAGATTGTCTGAAATTAGAACCAAGTGTAACTACATCAGAGATCTCTGATATGTATGATTCTCCTTCAACCGATGATTCCCTTGCTCTAGTTGGCATTTCGGGGTCAAAGAGTTACTTGAAATCTCTCTTAATACAAATGGGAATGAAATGCCAAGTCTCCAATATTACCGAAGACATTCTTTTACAGACTGCAGATGGGTTTTCGGATTCGCTTTTTCTCCCCGGTGACCATAATTCCGAATGGTTAACCTTCAGTTGCAAAGGTTGTTCTATAAAATTTGATCTCCCAAAAATGAAGGGGCGTAACTTGAAGAGTGTGATGTTGTTCATCGTATATCGTACTTCATCAGACAACATGACATCAGAAGGTTGCCTAGGTGTGTTGATCATAAACCACACAAAAACAACCATTCAGGCTTATAAAAGAGAGACACTAACCTCCTTTGAAGATGAGGACTGGCAGAGCATAACATCAAATCTAGAACCCGGTAACAAAGTGGAGGTTATGATTGTTTTTGCGGATGGATTTATTGTAGAAAAGACAACAGTATCTCTCTTGTATGATGAATCAATCAACAAAGAAATGGAGCACCACAATACCAGAGATAGGGAGGATGTTATTGTTGTTGAGAATAGAACATAA 4530 0.3786 MILILLIQQGRGIVLTTTYQEKPLSESSLNIIGECEIAIVMFSKSYTNSRLCLQELEEITKYCRTTPGLIILPFLVNMEEGMYGRAFHDFLDRVWIEEISKEEDKFMSWLAAFNKATKHSTRLLYFKESFKESFQESFRNESEYIKEVVEHVTAVLNKRDVSSFFYGERINSCTQDVIQLLKQSNHPLLLGIWGMEGIGKTTIARTIYDLIGPYFEHKIFVKDIRGVWEQRNGYYFLQKKISAMDRLLETKIKISITMESGKVSIKEKLQHKRVLIILDGVYKLEQLNVVSGSREWFGPGSKIIITTRDRHLLKEHGVDHIYKVKELDESESFELFNLNAFRETTTPRGDFGELCRQVVAYSGGLPPALEELGSFLNGKGVHEWKGVLRSLERLSIPVPQLLKALEKSFNDLSDEEKQIFFDIACFFNGMDQNDVLQTLSKSTQYATLQISLLEDKSLVTIDENNKLQMHVMLQAMARDVIKRKSRNVPDQQKRYDVFLSFRGNDSRVKFISHLHSSLQNAGIHVFKDDDEIQRGDQISTSLLRGIGRSRISIVVLSENYANSRWCMVELEKIMEIGKSKGLVVVPVFYEVDPSDVRHQEGQFGKGFDDLISTISLDESTKSNWRRELFDICGIAGFVLLDSRNESADVKNIVRHVTHLLDRTQLFVAEHPVGVESRVQAATKLLNIEKSEDVLLLGIWGMGGMGKTTIAKAIFNEIGSKFEGRSFLLNIREFWETNTDRVSLQQQVLCDVYKTTTFKISDIESGKNMLKQRLSQNRVLFVLDDVNELDQIKALCGSHKWFGPGSRIIITTRDLHLLNLCRVDNVYKLEEMGESESLELFSWHAFKQPSPAEDFATHSTNVIAYSGRLPLALEVLGSYLSDCEITEWQKVLEKLKCIPHDQVQKKLKISFDGLKDVTEKQIFLDVACFFIGMDKNDVIQILNGCGFFADIGIKVLVERSLVTVDNRNKLRTHDLLRDMGRQIIYEESPFDPEDRSRVWRRNEVFDILLKQKGTKAFKGLALEFPKQDIVCLNTKAFEKMNKLRLLQLAGVQLNGDFKYLSGELRWLCWRGFPSTYTPAEFQQGSLVVIKLKHSNLKQIWKESLMLENLKILNLSHSHDLTETPDFSYLPNLEKLVLKDCPRLSMVSHSIGSLQKLLLINLTDCTGLRKLPRSIYKLKSLETLILSGCSMIDELEEDLEQMESLTTLIADKTAITKVPFSIVRSKSIGFISLCGFEGFSRDVFPSLIWSWISPTNNVLSLGQTSASMSSLRSLSLECGSDLELTQVVARILDVLKGKDCLKLEPSVTTSEISDMYDSPSTDDSLALVGISGSKSYLKSLLIQMGMKCQVSNITEDILLQTADGFSDSLFLPGDHNSEWLTFSCKGCSIKFDLPKMKGRNLKSVMLFIVYRTSSDNMTSEGCLGVLIINHTKTTIQAYKRETLTSFEDEDWQSITSNLEPGNKVEVMIVFADGFIVEKTTVSLLYDESINKEMEHHNTRDREDVIVVENRT 1509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00866 1509 SUPERFAMILY L domain-like 1023 1275 - -
Vivi5g00866 1509 ProSiteProfiles TIR domain profile. 1 156 IPR000157 GO:0007165
Vivi5g00866 1509 SUPERFAMILY "Winged helix" DNA-binding domain 402 486 IPR036390 -
Vivi5g00866 1509 SUPERFAMILY Toll/Interleukin receptor TIR domain 23 110 IPR035897 -
Vivi5g00866 1509 Gene3D Ribonuclease Inhibitor 1008 1302 IPR032675 -
Vivi5g00866 1509 FunFam Disease resistance protein (TIR-NBS-LRR class) 491 662 - -
Vivi5g00866 1509 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 658 924 IPR027417 -
Vivi5g00866 1509 PRINTS Disease resistance protein signature 1174 1190 - -
Vivi5g00866 1509 PRINTS Disease resistance protein signature 865 879 - -
Vivi5g00866 1509 PRINTS Disease resistance protein signature 772 786 - -
Vivi5g00866 1509 PRINTS Disease resistance protein signature 695 710 - -
Vivi5g00866 1509 SMART AAA_5 692 820 IPR003593 GO:0016887
Vivi5g00866 1509 SMART AAA_5 186 327 IPR003593 GO:0016887
Vivi5g00866 1509 Coils Coil 1190 1210 - -
Vivi5g00866 1509 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 423 IPR027417 -
Vivi5g00866 1509 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 495 1298 IPR044974 GO:0006952
Vivi5g00866 1509 ProSiteProfiles TIR domain profile. 493 660 IPR000157 GO:0007165
Vivi5g00866 1509 Pfam NB-ARC domain 176 394 IPR002182 GO:0043531
Vivi5g00866 1509 Pfam NB-ARC domain 677 900 IPR002182 GO:0043531
Vivi5g00866 1509 Gene3D - 159 320 IPR027417 -
Vivi5g00866 1509 Gene3D - 658 825 IPR027417 -
Vivi5g00866 1509 SUPERFAMILY "Winged helix" DNA-binding domain 901 1006 IPR036390 -
Vivi5g00866 1509 Gene3D - 488 657 IPR035897 -
Vivi5g00866 1509 Gene3D - 326 413 IPR042197 -
Vivi5g00866 1509 Gene3D - 831 914 IPR042197 -
Vivi5g00866 1509 SMART till_3 494 634 IPR000157 GO:0007165
Vivi5g00866 1509 Gene3D - 10 158 IPR035897 -
Vivi5g00866 1509 Pfam TIR domain 29 157 IPR000157 GO:0007165
Vivi5g00866 1509 Pfam TIR domain 495 657 IPR000157 GO:0007165
Vivi5g00866 1509 SUPERFAMILY Toll/Interleukin receptor TIR domain 486 628 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00866 Vivi-Chr5 16590922 16598647 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00866 11 494 WRKY Transcription Factor Family AT4G12020 27.984 7.59e-38 154