Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00865 ATGTCTTGCTTCTCTTCCTGCTTTTATAGCCGCCGCAAATTCCAACCTGCATCTTCTACTACTGATGATACTGATACTACTAATCCAACAAGGAAGAGGAATAGTGTATATTTGAGTTTCCATGCCATAGATTATTGTAGCTCTTTTGTTTCAAGTCTCCATACGGCTCTTGCTTCAGATTCTGAAATTCTCTTTTGCGCGGACTATGACAGGCTTACAACTACATATCAAGAAAAACCATTATCAGAGTCTTCACTGAATATAATTGGAGAGTGCGAAATAGCAATAGTCATGTTTTCAAAGAGTTATACTAACTCAAGGTTGTGTCTTCAAGAATTGGAAGAGATAACCAAATATTGTCGTACCACACCTGGTCTTATTATTCTGCCTTTTCTCGTAAACATGGAAGAAGGTATGTATGGAAGGGCGTTTCATGATTTTTTGGATAGAGTATGGATAGAGGAAATCTCCAAAGAGGAAGACAAGTTCATGAGTTGGCTAGCAGCGTTCAATAAAGCTACCAAACACTCTACTAGATTACTATATTTCAAAGAAAGTTTCAAAGAAAGTTTCCAAGAAAGTTTCAGGAATGAAAGTGAATATATTAAGGAGGTAGTTGAACATGTTACTGCTGTGCTAAACAAGAGAGACGTGTCCAGTTTTTTTTATGGAGAGAGAATAAATTCTTGCACACAAGATGTGATTCAACTATTGAAACAATCAAATCATCCTCTCCTACTAGGGATATGGGGGATGGAAGGGATTGGTAAAACGACCATTGCCCGAACTATTTATGATCTGATTGGTCCTTATTTTGAGCACAAGATCTTTGTCAAAGATATCAGGGGAGTTTGGGAACAAAGGAATGGTTATTATTTTTTGCAAAAGAAAATTTCTGCTATGGACAGATTATTAGAAACAAAGATAAAAATATCTATTACAATGGAATCAGGAAAAGTGTCTATAAAAGAAAAGCTTCAACATAAAAGGGTACTTATTATACTCGATGGTGTTTATAAATTGGAGCAGCTAAATGTTGTGTCTGGAAGTCGTGAATGGTTTGGTCCAGGTAGCAAAATAATCATCACGACAAGAGATAGGCATCTACTTAAGGAGCACGGAGTTGACCATATATACAAAGTGAAAGAATTGGACGAAAGTGAATCGTTTGAGCTTTTTAATTTAAATGCATTCAGAGAAACAACAACTCCTCGAGGGGATTTTGGAGAACTTTGCAGACAGGTAGTTGCCTATTCTGGGGGATTGCCTCCTGCTCTTGAAGAGCTTGGGTCCTTTTTGAATGGAAAGGGAGTACATGAGTGGAAGGGTGTGTTGAGGAGTCTCGAAAGACTTTCCATTCCAGTTCCACAACTACTAAAAGCTCTTGAAAAGAGTTTTAATGATTTGAGTGATGAAGAGAAACAAATATTCTTTGATATAGCATGTTTCTTTAATGGGATGGACCAAAATGATGTGCTCCAAACATTATCCAAGTCAACACAATATGCAACTCTTCAAATAAGCCTCCTTGAAGACAAAAGCCTTGTAACCATTGACGAGAATAACAAGCTTCAAATGCATGTTATGCTACAAGCCATGGCAAGAGATGTCATTAAGAGGAAATCTAGAAATGTGCCTGATCAGCAAAAGAGGTACGACGTGTTCTTGAGTTTTAGAGGGAACGACAGTCGTGTGAAATTCATTTCACATCTGCATTCCTCTCTCCAAAATGCGGGGATTCATGTTTTCAAAGACGATGATGAGATTCAACGAGGAGATCAGATCTCAACATCACTGTTGCGAGGAATTGGAAGGTCTAGAATATCTATAGTTGTTTTGTCTGAAAATTATGCTAATTCAAGATGGTGTATGGTAGAGTTGGAGAAGATCATGGAAATTGGCAAAAGCAAGGGTCTGGTGGTTGTGCCAGTGTTCTATGAGGTGGATCCCTCAGATGTACGTCATCAAGAAGGTCAGTTTGGGAAAGGTTTTGATGATCTTATATCAACAATCTCATTGGATGAATCCACAAAGAGTAATTGGAGAAGAGAACTCTTTGATATTTGTGGCATAGCAGGGTTTGTCCTCCTTGATTCCAGGAATGAAAGTGCTGATGTCAAGAATATTGTTAGACATGTTACTCATTTGCTAGATAGGACACAATTATTCGTTGCTGAACATCCAGTGGGAGTAGAATCTCGGGTGCAAGCTGCAACTAAGCTATTAAACATTGAAAAATCAGAAGATGTTTTACTTCTAGGGATATGGGGAATGGGGGGTATGGGCAAAACAACCATTGCCAAAGCAATTTTTAATGAAATTGGGAGCAAATTTGAGGGAAGGAGCTTCCTTCTGAATATAAGGGAATTTTGGGAGACAAATACTGATAGAGTTTCACTACAGCAACAGGTGCTTTGTGATGTTTACAAAACAACAACATTCAAGATAAGTGACATCGAGTCAGGGAAAAATATGTTAAAGCAAAGACTCTCCCAGAATAGGGTGCTTTTTGTGCTTGATGATGTAAATGAATTGGACCAAATAAAGGCTTTGTGTGGAAGCCACAAATGGTTTGGTCCGGGGAGTAGAATAATCATCACTACAAGAGACTTGCATCTTCTTAATTTGTGTAGAGTTGATAATGTGTATAAATTAGAAGAAATGGGCGAAAGTGAATCTCTTGAGCTTTTCAGTTGGCATGCATTCAAGCAACCAAGTCCAGCAGAGGATTTTGCTACACATTCAACAAATGTGATTGCTTATTCTGGGAGATTGCCACTGGCACTTGAAGTTCTTGGATCCTATTTGTCTGACTGTGAAATAACAGAGTGGCAGAAAGTTTTGGAGAAACTCAAATGTATTCCACATGATCAAGTACAGAAGAAGCTAAAAATAAGCTTCGATGGTTTAAAAGATGTTACAGAGAAACAAATATTCCTTGATGTAGCCTGTTTCTTTATTGGGATGGATAAAAATGATGTAATACAAATATTAAATGGGTGTGGGTTTTTTGCTGATATTGGAATCAAAGTCCTTGTAGAGCGAAGCCTTGTAACTGTTGACAATAGGAACAAGCTTAGAACGCATGATTTGTTGAGAGACATGGGAAGACAAATAATATATGAGGAATCGCCATTTGATCCTGAGGACCGTAGTAGGGTGTGGCGCCGTAATGAAGTGTTTGATATATTATTAAAGCAGAAGGGAACAAAAGCTTTCAAGGGACTGGCTTTAGAGTTTCCAAAACAAGATATAGTTTGTCTGAATACCAAAGCATTTGAGAAGATGAATAAACTCAGATTGCTTCAACTTGCTGGGGTGCAGCTTAATGGAGATTTTAAATATCTTTCAGGAGAACTTAGGTGGTTGTGCTGGCGTGGATTTCCATCAACTTACACTCCTGCAGAATTTCAACAAGGAAGTCTAGTTGTCATCAAATTAAAACATAGCAATCTCAAACAGATATGGAAAGAGAGCCTGATGCTAGAGAATCTAAAAATTCTTAATCTTAGTCATTCTCATGATTTGACTGAAACCCCAGACTTTTCATACTTGCCTAATCTTGAAAAGCTAGTACTCAAAGACTGTCCAAGGTTGTCTATGGTCTCCCATAGCATTGGATCTCTCCAGAAACTTCTTCTGATAAATTTGACAGATTGCACAGGTCTTCGAAAACTTCCGAGAAGCATCTATAAATTAAAATCTCTCGAAACTTTGATTCTTTCAGGATGTTCCATGATTGACGAATTGGAGGAGGACTTGGAACAAATGGAATCATTGACAACCTTGATCGCAGATAAGACTGCTATAACAAAAGTGCCCTTTTCAATAGTAAGATCCAAAAGCATTGGATTTATTTCTTTATGCGGCTTTGAAGGATTTTCCCGTGATGTATTTCCTTCACTTATTTGGTCTTGGATCTCACCAACAAACAATGTGCTATCCCTAGGTCAAACATCAGCATCCATGTCATCTCTTAGAAGTCTTAGTTTGGAGTGTGGCTCAGATCTAGAACTAACTCAAGTTGTAGCAAGAATTTTGGATGTATTAAAAGGCAAAGATTGTCTGAAATTAGAACCAAGTGTAACTACATCAGAGATCTCTGATATGTATGATTCTCCTTCAACCGATGATTCCCTTGCTCTAGTTGGCATTTCGGGGTCAAAGAGTTACTTGAAATCTCTCTTAATACAAATGGGAATGAAATGCCAAGTCTCCAATATTACCGAAGACATTCTTTTACAGACTGCAGATGGGTTTTCGGATTCGCTTTTTCTCCCCGGTGACCATAATTCCGAATGGTTAACCTTCAGTTGCAAAGGTTGTTCTATAAAATTTGATCTCCCAAAAATGAAGGGGCGTAACTTGAAGAGTGTGATGTTGTTCATCGTATATCGTACTTCATCAGACAACATGACATCAGAAGGTTGCCTAGGTGTGTTGATCATAAACCACACAAAAACAACCATTCAGGCTTATAAAAGAGAGACACTAACCTCCTTTGAAGATGAGGACTGGCAGAGCATAACATCAAATCTAGAACCCGGTAACAAAGTGGAGGTTATGATTGTTTTTGCGGATGGATTTATTGTAGAAAAGACAACAGTATCTCTCTTGTATGATGAATCAATCAACAAAGAAATGGAGCACCACAATACCAGAGATAGGGAGGATGTTATTGTTGTTGAGAATAGAACATAA 4701 0.3799 MSCFSSCFYSRRKFQPASSTTDDTDTTNPTRKRNSVYLSFHAIDYCSSFVSSLHTALASDSEILFCADYDRLTTTYQEKPLSESSLNIIGECEIAIVMFSKSYTNSRLCLQELEEITKYCRTTPGLIILPFLVNMEEGMYGRAFHDFLDRVWIEEISKEEDKFMSWLAAFNKATKHSTRLLYFKESFKESFQESFRNESEYIKEVVEHVTAVLNKRDVSSFFYGERINSCTQDVIQLLKQSNHPLLLGIWGMEGIGKTTIARTIYDLIGPYFEHKIFVKDIRGVWEQRNGYYFLQKKISAMDRLLETKIKISITMESGKVSIKEKLQHKRVLIILDGVYKLEQLNVVSGSREWFGPGSKIIITTRDRHLLKEHGVDHIYKVKELDESESFELFNLNAFRETTTPRGDFGELCRQVVAYSGGLPPALEELGSFLNGKGVHEWKGVLRSLERLSIPVPQLLKALEKSFNDLSDEEKQIFFDIACFFNGMDQNDVLQTLSKSTQYATLQISLLEDKSLVTIDENNKLQMHVMLQAMARDVIKRKSRNVPDQQKRYDVFLSFRGNDSRVKFISHLHSSLQNAGIHVFKDDDEIQRGDQISTSLLRGIGRSRISIVVLSENYANSRWCMVELEKIMEIGKSKGLVVVPVFYEVDPSDVRHQEGQFGKGFDDLISTISLDESTKSNWRRELFDICGIAGFVLLDSRNESADVKNIVRHVTHLLDRTQLFVAEHPVGVESRVQAATKLLNIEKSEDVLLLGIWGMGGMGKTTIAKAIFNEIGSKFEGRSFLLNIREFWETNTDRVSLQQQVLCDVYKTTTFKISDIESGKNMLKQRLSQNRVLFVLDDVNELDQIKALCGSHKWFGPGSRIIITTRDLHLLNLCRVDNVYKLEEMGESESLELFSWHAFKQPSPAEDFATHSTNVIAYSGRLPLALEVLGSYLSDCEITEWQKVLEKLKCIPHDQVQKKLKISFDGLKDVTEKQIFLDVACFFIGMDKNDVIQILNGCGFFADIGIKVLVERSLVTVDNRNKLRTHDLLRDMGRQIIYEESPFDPEDRSRVWRRNEVFDILLKQKGTKAFKGLALEFPKQDIVCLNTKAFEKMNKLRLLQLAGVQLNGDFKYLSGELRWLCWRGFPSTYTPAEFQQGSLVVIKLKHSNLKQIWKESLMLENLKILNLSHSHDLTETPDFSYLPNLEKLVLKDCPRLSMVSHSIGSLQKLLLINLTDCTGLRKLPRSIYKLKSLETLILSGCSMIDELEEDLEQMESLTTLIADKTAITKVPFSIVRSKSIGFISLCGFEGFSRDVFPSLIWSWISPTNNVLSLGQTSASMSSLRSLSLECGSDLELTQVVARILDVLKGKDCLKLEPSVTTSEISDMYDSPSTDDSLALVGISGSKSYLKSLLIQMGMKCQVSNITEDILLQTADGFSDSLFLPGDHNSEWLTFSCKGCSIKFDLPKMKGRNLKSVMLFIVYRTSSDNMTSEGCLGVLIINHTKTTIQAYKRETLTSFEDEDWQSITSNLEPGNKVEVMIVFADGFIVEKTTVSLLYDESINKEMEHHNTRDREDVIVVENRT 1566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00865 1566 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 231 480 IPR027417 -
Vivi5g00865 1566 FunFam Disease resistance protein (TIR-NBS-LRR class) 548 719 - -
Vivi5g00865 1566 Pfam NB-ARC domain 734 957 IPR002182 GO:0043531
Vivi5g00865 1566 Pfam NB-ARC domain 233 451 IPR002182 GO:0043531
Vivi5g00865 1566 Coils Coil 1247 1267 - -
Vivi5g00865 1566 SUPERFAMILY L domain-like 1027 1332 - -
Vivi5g00865 1566 SUPERFAMILY "Winged helix" DNA-binding domain 459 543 IPR036390 -
Vivi5g00865 1566 Gene3D Ribonuclease Inhibitor 1076 1225 IPR032675 -
Vivi5g00865 1566 SMART AAA_5 749 877 IPR003593 GO:0016887
Vivi5g00865 1566 SMART AAA_5 243 384 IPR003593 GO:0016887
Vivi5g00865 1566 SUPERFAMILY Toll/Interleukin receptor TIR domain 32 167 IPR035897 -
Vivi5g00865 1566 Gene3D - 216 377 IPR027417 -
Vivi5g00865 1566 Gene3D - 715 882 IPR027417 -
Vivi5g00865 1566 Gene3D Ribonuclease Inhibitor 1226 1347 IPR032675 -
Vivi5g00865 1566 ProSiteProfiles TIR domain profile. 32 213 IPR000157 GO:0007165
Vivi5g00865 1566 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 715 981 IPR027417 -
Vivi5g00865 1566 Gene3D - 31 215 IPR035897 -
Vivi5g00865 1566 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 552 1355 IPR044974 GO:0006952
Vivi5g00865 1566 SMART till_3 33 180 IPR000157 GO:0007165
Vivi5g00865 1566 SMART till_3 551 691 IPR000157 GO:0007165
Vivi5g00865 1566 Pfam TIR domain 552 714 IPR000157 GO:0007165
Vivi5g00865 1566 Pfam TIR domain 36 214 IPR000157 GO:0007165
Vivi5g00865 1566 Gene3D - 888 971 IPR042197 -
Vivi5g00865 1566 Gene3D - 383 470 IPR042197 -
Vivi5g00865 1566 PRINTS Disease resistance protein signature 1231 1247 - -
Vivi5g00865 1566 PRINTS Disease resistance protein signature 752 767 - -
Vivi5g00865 1566 PRINTS Disease resistance protein signature 829 843 - -
Vivi5g00865 1566 PRINTS Disease resistance protein signature 922 936 - -
Vivi5g00865 1566 SUPERFAMILY Toll/Interleukin receptor TIR domain 543 685 IPR035897 -
Vivi5g00865 1566 Gene3D - 545 714 IPR035897 -
Vivi5g00865 1566 ProSiteProfiles TIR domain profile. 550 717 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00865 Vivi-Chr5 16590921 16598648 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00865 86 551 WRKY Transcription Factor Family AT4G12020 28.205 8.40e-38 154