Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00856 ATGTCTTCCAAATTTGAATCCAGATCTAGTTCCGGTCCAAACCAGAAGAGGTACAACGTGTTCTTGAGTTTCTGCCCTACAGATGTCGGACAGTTTGTTCCCAATCTCGATATGGCTCTTAGTTCAGAAGCTGGAATCTTTGTTTTTGGGGAAGATGAGAGGTTTCAACACGGGGAACAGGTAGAGTCGGTGCTGAATGTAATTCGAGAATGCAGAATTGCTATAGTTGTATTTTCAAGAAATTATGCTAATTCAAGCTCGTGTATTAAAGAATTGGAGAAAATAACCGAGTGTTGCCGAACCTCCGATTTTAGTGTTCTTCCCTTGTTTTGTGATGGTGTTCATGCCTCATATGGAAGTTTAAAGGGAGATATGTTTGGAGAGTCTTTTCCTAATTTTATTGATAGAATATCCATGAAGGGAATCCCTAAAAATGAAGATAAGCTCATGACTTGGGTGGCTTTGATCACTAAAGCTACCAAATATTTAGGATCAAGTGATCGCCTACACAAACCCACACACAGGTATGAAAATGTATATATTAAGGATATAGTTGAACGTGTTACGTGTGTGATAAGCAACAAATACTCATTTGCGACTACCCATGCACCGAGTGTAAAATCTAGTGTGCAAGATGTGGTTCAACTATTGAAACAATCAAAATATCCTCTCCTACTAGGGATATGGGGGATGACAGGGATTGGTAAATCAACCATTGCCGAAGCCATTTTTGTTCAAATTGGTCTTTATTTTGAATACAAGTGCTTCCTCGATAACGTTGGGGAAGTTGGGACAAAAAATAATGATCTACTTTCATTGCAAGAGAAACTTCTTTCTGATATTAACGGACCAACTGAAGAAGAGATGCCTATATCCGCAGTTGAATCAAGAGTGATCTTAAAACAAATTCTTCGAAGTAAAAGAATACTTCTTGTACTTGACAATGTTGATAAATTGGAGCAGCTACATGCTTTGTGTGGAAGTCGTGAATGGTTTGGTGAAGGTAGCAAAATAATCATCACGACAAGAGACAGGCATCTACTCAAGGAGCATGGAGTTGACCACATATATCCAGTGAAACAACTGGATGAAAGTAAATCACTCGAGGTTTTGAATTGGGGTGCATTCAGCCAAGCTCGGAATCCTCGAGAAGATTTTGTTGAAGTTTCTAGACAACTAGTTGCTTATTGTGGGGGATTACCTCTTGCTCTTGAAGCCCTTGGGATGTTCTTGCGCAGAAAGGAAGTACTTGAATGGAAGGGTGTGTTGAGGAGTCTCCAAAGATTTTCAATTCCAGCTCCACGACTACTAGAAGCTCTTGAAAAGAGTTTTAGAAATTTGAGTAATGAAGAGAAATGCATATTCCTTGATATAGCATATTTCTTTATAGGGATGAACCAAAAGGATGTACTCCAAACATTAAATAGGTCAACACAATCCGCAGCTTTTCAAATAAGTCTCCTTCAAGACAAGAACTTTGTAACTATTGATGAGAATAACAAACTTGAAATGCCTGTTCTGCTACAAGCCATGGCAAGAGATATCATTAAGAGGGAATCAAGTAATAAGACTCATCAGCCAAAGATATACGATGTGTTTTTGAGCTTCAGAGGAGAAGATAATCGGTCAAAGTTCGTGTCACATCTCTATTCTTCTCTTCAAAATGCAGGGATTTATGTTTTCAAAGACGATGACGAGATTCAACGAGGAGATCAAATCTCAATCTCACTACTGCAAGCAATTGGACAGTCTAGAATTTCTATCGTTGTTTTGTCTACAAATTATGCTAATTCTAGATGGTGTATGCTAGAGTTGGAGAAGATCATGGAAATTGGCAAGGTCAAGGGTCTGGTGGTCGTGCCAGTGTTCTATGAGGTAGATCCCTCAGAAGTACGTCACCAGAAAGGTCTTTTTGGAAAAGCTTTTGAAGGTCTTATATCAACAACAATCTCCGTGGATAAATCCACTATGAGTAATTGGAGAAAAGAACTCTTTGATATCGGTGGCATAGGAGGGTTTGTACTCGTAGATTCCAGGAATGAAAGTGGTGATATCAAGAATATTGTTGAACATGTTACTCGTTTGCTAGACAGGACAGAATTATTTGTTGCTGAACATCCAGTGGGAATTGAATCTCGTGTGCAAGCCGCAGCAAAGCTATTAAACATCCAAATAGCAGATGATGTTTTACTTCTAGGGATTTGGGGCATGGGGGGTATGGGAAAAACAACCATTGCCAAAGCCATCTATAATCAAATTGGGAGCAAATTTGAGGGAAAGAGCTTCCTTTTGAATATAAGGGAACTTTGGGAAACAGATACTAATCAAGTTTCATTACAACAACAAGTACTTTGTGATGTTTACAAAACAACGTCATTCAAGATACGTGACATTGAATCAGGGAAAAATATATTGAAGCAAAGACTTTCACAAAAAAAGGTACTTTTTGTGCTTGATGATGTGAATGAATTGGACCAACTAAAGGCTTTGTGTGGAAGCCGCGAATGGTTTGGTTCAGGAAGTAGAATAATCATTACAACCAGAGATATGCATCTTCTTAGATCGTGTAGAGTTGATAGAGTGTATAAAATAGAAGAAATGGATGAAAGTGAATCTCTTGAGCTTTTTAGTTGGCATGCATTCAAGCAACCAAGTCCGATAGAAGATTTTACTACACATTCATCCGATGTGATTGCTTATTCTGGGAGGTTGCCACTGGCACTTGAAGTCCTTGGCTCCTATTTGTCTGACTGTGAAATAACAGAGTGGCACAAAGTTTTGGACAAACTCAAATGTATCCCCCATGATCAAGTACAGAAGAAGCTAAGAGTAAGCTTCGATGGTTTAAAAGATGTTACTGAACAACAAATATTTCTTGATATAGCTTGTTTTTTTATTGGAATGGACAGAAATGACGTCATACAAATATTAAATGGGTGTGGATTTTTTGCCGATATTGGAATTAAAGTCCTTGTAGAGCGAAGTCTTGTAACGGTTGACAAAAGGAACAAGCTTAGAATGCATGATCTGCTGAGAGACATGGGAAGACAAATAATTTATGAGGAATCCCCATTTGATCCTGAGAATCGCAGCAGGTTGTGGCGCCGAGAGGATGTGTTTGATATGTTATCAAAGCAAACGGGAACAGAAGCTGTCAAGGGTCTGAATTTGGAGTTTCCAGGAAAAAATACAGTTTGTCTGAATACCAATGCATTTAAGAAGATGAATAAACTCAGATTGCTTCAACTTGCTGGGGTACAGCTTAATGGAGATTTTAAAAATCTTTCAACAGATCTAAGGGGGCTGTACTGGCATGGATTTCCGTCAACTTACACTCCTGCAGGATTTCGGCAAGGAAGACTAGTTGTCGTCGAATTAAAATATAGTAATCTCAAACAAATATGGAAGAAAAGCCAGATGCTAGAGAATCTAAAAATTCTTAATCTTAGTCATTCTCGGGATTTGACTGAAACTCCAGACTTTTCATACTTGCCTAATCTTGAAAAGCTAGTACTCAAAGACTGCCCAAGTTTGTCTACAGTCTCCCATAGCATTGGATCTCTCAGTAAAATTCTTCTTATAAATTTGACAGACTGCACAGGTCTTCGAAAACTTCCTAGAAGCATCTATAAATTAAAATCTCTAGAAACTCTGATTCTTTCTGGATGTTCCATGATTACCAAATTGGAGGAAGACATGGAACAGATGGAATCATTGATAACTTTGATTGCAGATAAGACTGCAATAACAAAAGTGCCTTTTTCAATAGTAAGATCGAAAAACATTGGTTACATTTCTCTATGTGGCTTTGAAGGATTTTCACGTGATGTATTTCCTTCTATCATTCAGTCTTGGATGTCACCATCAAAGAATTTGATATCTCTAGTTCAAACATATGTGCCCACTTCATCTCTTCGTACTTTCAAGGACCTTCTAAAGCTTCGAATTCTTTGTGTAGAGTGTGGTTCTAAACAACAACTAAGTCGAGATGTAGAAAATGTTTTGGATGTATTAAAAGCTACAAATTATCATAAATTGGATGCAAGGGCAACTGCACCACAAATCTCTGATATGTTTCCTTCTCCTTTAATTGATGATTGCCTTGGTGAAGTTCGCACTTCAGGGTCAAAGAATTACTTGAAATCTTTCTTAATTCAAATGGGAACGAAATTCCAAGTATCCAATATTGCCGAAGACAACATTTTACAGACAGCAGATGGGACTTGGGATTCATTTTTGCTCCCCTGTGACAATATATCCGATTGGTTAAACTTCAGTTGCCAAGGTAGTTCTATAATATTTGTTGTCCCGGCAATGAAAGGGAGCATCCTGAAGAGTATGATGTTGTTCGTCCTCTATTACTCTTCCCAAGACAACATAATATCAGAAGGTTGCCATGGTATGTTGATCATAAATTACACAAAGACAACCATTCAGGTCTATAAAAGAGATACACTAATGTCCTTTGTGGATGGGGATTGGCAGAGTATTACAGCAAATCTAGAACCTGGTAACGAAGTGGAGGTTATGGTTGTTTTTGGGGAGGGATTCACTGTAGAGAAGACAACAATATCTTTCTTATATGATAAACCAATCAACCAAGAAATGGAAAACCGCAATGAGGTAGACGAGGAGGGTGTTATTGTTTATTATGGTCATGATGAGGAGGATGTTAGTGTTTTTGATGGTTATAATACTGATGTGCCAGTGGACAACATTGCTACTGGTCTTGGTCAAGATGAAACTATAAGTGAAGATAGGCGCTTGCATGCAATGGATAAGAATTCTGATGATGATGCCATAGCAACAAGTAAGAAACCTGCCTGCTGTTTCTGGTGGCGGTGA 4845 0.3831 MSSKFESRSSSGPNQKRYNVFLSFCPTDVGQFVPNLDMALSSEAGIFVFGEDERFQHGEQVESVLNVIRECRIAIVVFSRNYANSSSCIKELEKITECCRTSDFSVLPLFCDGVHASYGSLKGDMFGESFPNFIDRISMKGIPKNEDKLMTWVALITKATKYLGSSDRLHKPTHRYENVYIKDIVERVTCVISNKYSFATTHAPSVKSSVQDVVQLLKQSKYPLLLGIWGMTGIGKSTIAEAIFVQIGLYFEYKCFLDNVGEVGTKNNDLLSLQEKLLSDINGPTEEEMPISAVESRVILKQILRSKRILLVLDNVDKLEQLHALCGSREWFGEGSKIIITTRDRHLLKEHGVDHIYPVKQLDESKSLEVLNWGAFSQARNPREDFVEVSRQLVAYCGGLPLALEALGMFLRRKEVLEWKGVLRSLQRFSIPAPRLLEALEKSFRNLSNEEKCIFLDIAYFFIGMNQKDVLQTLNRSTQSAAFQISLLQDKNFVTIDENNKLEMPVLLQAMARDIIKRESSNKTHQPKIYDVFLSFRGEDNRSKFVSHLYSSLQNAGIYVFKDDDEIQRGDQISISLLQAIGQSRISIVVLSTNYANSRWCMLELEKIMEIGKVKGLVVVPVFYEVDPSEVRHQKGLFGKAFEGLISTTISVDKSTMSNWRKELFDIGGIGGFVLVDSRNESGDIKNIVEHVTRLLDRTELFVAEHPVGIESRVQAAAKLLNIQIADDVLLLGIWGMGGMGKTTIAKAIYNQIGSKFEGKSFLLNIRELWETDTNQVSLQQQVLCDVYKTTSFKIRDIESGKNILKQRLSQKKVLFVLDDVNELDQLKALCGSREWFGSGSRIIITTRDMHLLRSCRVDRVYKIEEMDESESLELFSWHAFKQPSPIEDFTTHSSDVIAYSGRLPLALEVLGSYLSDCEITEWHKVLDKLKCIPHDQVQKKLRVSFDGLKDVTEQQIFLDIACFFIGMDRNDVIQILNGCGFFADIGIKVLVERSLVTVDKRNKLRMHDLLRDMGRQIIYEESPFDPENRSRLWRREDVFDMLSKQTGTEAVKGLNLEFPGKNTVCLNTNAFKKMNKLRLLQLAGVQLNGDFKNLSTDLRGLYWHGFPSTYTPAGFRQGRLVVVELKYSNLKQIWKKSQMLENLKILNLSHSRDLTETPDFSYLPNLEKLVLKDCPSLSTVSHSIGSLSKILLINLTDCTGLRKLPRSIYKLKSLETLILSGCSMITKLEEDMEQMESLITLIADKTAITKVPFSIVRSKNIGYISLCGFEGFSRDVFPSIIQSWMSPSKNLISLVQTYVPTSSLRTFKDLLKLRILCVECGSKQQLSRDVENVLDVLKATNYHKLDARATAPQISDMFPSPLIDDCLGEVRTSGSKNYLKSFLIQMGTKFQVSNIAEDNILQTADGTWDSFLLPCDNISDWLNFSCQGSSIIFVVPAMKGSILKSMMLFVLYYSSQDNIISEGCHGMLIINYTKTTIQVYKRDTLMSFVDGDWQSITANLEPGNEVEVMVVFGEGFTVEKTTISFLYDKPINQEMENRNEVDEEGVIVYYGHDEEDVSVFDGYNTDVPVDNIATGLGQDETISEDRRLHAMDKNSDDDAIATSKKPACCFWWR 1614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00856 1614 SUPERFAMILY L domain-like 1006 1320 - -
Vivi5g00856 1614 ProSiteProfiles TIR domain profile. 16 141 IPR000157 GO:0007165
Vivi5g00856 1614 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 209 458 IPR027417 -
Vivi5g00856 1614 SMART till_3 17 166 IPR000157 GO:0007165
Vivi5g00856 1614 SMART till_3 529 670 IPR000157 GO:0007165
Vivi5g00856 1614 Pfam TIR domain 530 692 IPR000157 GO:0007165
Vivi5g00856 1614 Pfam TIR domain 18 131 IPR000157 GO:0007165
Vivi5g00856 1614 Coils Coil 1226 1246 - -
Vivi5g00856 1614 Gene3D - 361 448 IPR042197 -
Vivi5g00856 1614 Gene3D - 866 950 IPR042197 -
Vivi5g00856 1614 PRINTS Disease resistance protein signature 731 746 - -
Vivi5g00856 1614 PRINTS Disease resistance protein signature 901 915 - -
Vivi5g00856 1614 PRINTS Disease resistance protein signature 808 822 - -
Vivi5g00856 1614 PRINTS Disease resistance protein signature 1139 1155 - -
Vivi5g00856 1614 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 694 961 IPR027417 -
Vivi5g00856 1614 SMART AAA_5 222 363 IPR003593 GO:0016887
Vivi5g00856 1614 SMART AAA_5 728 868 IPR003593 GO:0016887
Vivi5g00856 1614 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 117 IPR035897 -
Vivi5g00856 1614 SUPERFAMILY Toll/Interleukin receptor TIR domain 521 666 IPR035897 -
Vivi5g00856 1614 Gene3D - 695 861 IPR027417 -
Vivi5g00856 1614 Gene3D - 195 355 IPR027417 -
Vivi5g00856 1614 Gene3D - 12 194 IPR035897 -
Vivi5g00856 1614 ProSiteProfiles TIR domain profile. 528 696 IPR000157 GO:0007165
Vivi5g00856 1614 Gene3D Ribonuclease Inhibitor 1044 1364 IPR032675 -
Vivi5g00856 1614 Pfam NB-ARC domain 718 936 IPR002182 GO:0043531
Vivi5g00856 1614 Pfam NB-ARC domain 208 431 IPR002182 GO:0043531
Vivi5g00856 1614 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 530 1329 IPR044974 GO:0006952
Vivi5g00856 1614 Gene3D - 523 694 IPR035897 -
Vivi5g00856 1614 FunFam Disease resistance protein (TIR-NBS-LRR class) 526 698 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00856 Vivi-Chr5 16379457 16390512 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00856 14 523 WRKY Transcription Factor Family AT4G12020 29.014 1.67e-37 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00856 - - mtr:11411578 2208.72