Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00854 ATGTCTTCTTCCATTACTACTTATTCAAAGAGGAAGAAGACCTACGATGTCTACTTGAGTTTCAGCGCAAAAGTTCCATCTACTTTTGTTCGGAAACTCCATAAGGCTCTCTGTACATATGTTCCACGAACTCGTATTTTCTTGGACCGTACGAAGCTTCTAAGTACAAATTGGGAAACAACACCTTCAGAGTCATTGCTTATAATTGAAAAGTGCAAAATGGTTGTAATCCTACTTTCAAGTATTTATATGAGTTCACCATCGTGTCTTGGAGAACTCGAGAAAATAACTGAGTGTTGCCTAACCACAACTGATCTTGTTGTTCTGCCTGTGTTGTATCACTTCGACCAAAGATTTCGAGGAGACATGTTTCGAAAGGCTTTTCATGATTTTCTGGACAGAATCCCTATAAAGAAAATATCACCAGAAGAAGACAATATTATGACTTGGGTGGAAGCGATTACTAAATCTACCCAATATCCAACAGATTTCATACCCACAGACAGGAACGAGTGTGACTGTGTCAAGAGTGTAGTTGAACGTGTTATTTATGCGCTATACAAGATAAGACCAGCATTGTCAAGTACTTTCTATACACCTAGTGTAAAATCTGGTGTGCAAGACGTGCTTCAACTATTGAAACAATCAAAATGCCCTCTCGTAATAGGGATTTGGGGGATAGCTGGGATTGGTAAAACAAGCATTGCCAAAACCATTTATGATATGATTGGTCCTTATTTTGAGGGAAAGTGCATGCTCGATAATGTTAGTGAAGTTTGGGAACGATATACTGGTCCATTTTCTTTACAGGAAGAACTTCTTTTTTGTGTCAACAATGCCACTGGATTTGAAAAAGAGACTTTAAAAGGAAACCTTCAAAATAAAAGGGTACTTCTTATACTGGATGATGTTAATAAATTGGAGCAGCTAAATTCTTTGTGTGGAAGTCGTGAATGGTTTGGTGCAGGTAGCAAAATAATCATCACGACAAGAGATAGACATCTACTTAAGGAGTATGGAGTTGATCATATATATACAATGAAACAACTGGACCAAAGTGAATCGCTTGAGGTTTTCAAGTGGGGTGCATTCGGCAACGAAACAACTCTTCCAGAAGATTTTGCTGAACTTTCCAGACAGGTAGTTGCTTATTCTGGGGGATGGCCTCTTGCTCTTATAACCCTAGGGAGGCTTTTGCGTGGAAAGGAGGCCCTTCAGTGGAAAGGTGTGTTATGGAGTCTCAAAAATATGTCCATTCCAGCTCCACGACTACTGAATATCCTAGAAAAGAGTTTTAACGAGTTGAGTGATAACGAGAAACAAACATTCCTTGATATAGCAAGTTTCTTTATCGGGAAGAACCAAAATGATGTACTTCAAACATTAAATAGATCAACGCAAAGCCCAACTCTTCAAGTAAGCCTTCTTCAAAATAAGAGCCTTGTAACCATTGATGAGAATAACAAGCTTCAAATGCATGTTCTGCTTCAAGCTATGGCAAGAGATATCATTAATAGGGAATCCAGAAGTAGAACTATTCAGCCAAAGATGTATGACGTGTTCTTGAGTTTTAGAGGGGAAGACAGTCGTGCAAAGTTCATGTCACATCTCTATTCTTCTCTTCAAGATGCAGGTATATATGCTTTCAGAGACGATGATGAGATTCAACATGGAGATCAGATCTCAATCTCACTTTTGCGAGCAATTGAACAATCTAGGATTTCTATCGTTGTTTTGACTACAAACTATGCTAATTCAAGATGGTGCATGCTAGAGTTGGAAAGAATCATTGAAATTAGCAAAGCCAATGGTTTGGATGTTGTGCCAGTGTTCTATGAGGTAGATCCCTCAGAAGTACGTCATCAGGAAGGTCAGTTTGGGAAAGCTTTTGAAGAACTTAGATCAACAACCTCAGTGAATGAATCCACAAAGACTAATTGGAGAAGAGACCTCTTTGATATTGGAAGCAAGGCAGGGTTTGTACTCAAAGATTCAAGGAATGAAAGTGAAGATGTCAAGAATATTGTTGAAAGTGTCTCCCGTTTGCTAGATAGGACAGAGTTATTTGTTGCTGAACATCCAGTAGGTGTAGAATCCCGTGTGGAAGCAACAACTAAACTATTAAATATCCAAAAATCAGAAGATGTTTTAATTCTTGGAATATGGGGAATGGGGGGCATGGGTAAGACAACCATTGCAAAAGCAATTTATAATCAAATTGGAAGCAAATTTGAGGGAAAGAGCTTCCTTCTGAATATAAGGGAAATTTGGGAGACAGATACTAATCAAGTTTCTTTGCAGCAACAAGTACTCTGTGATATTTACAAAACAATGACATTCAAGATACGTGATATTGAATCTGGGAAAAATATCTTGAAGGAAAGACTTTCCCAAAATAGGGTACTTTTTGTACTTGATGATGTGAATGAAATAGACCAAATAAATGCTTTGTGTGGAAGTCGCGAATGGTTTGGTCCAGGGAGTAGAATAATCATCACAACAAGAGATATGCACATTCTTAATTCATGTAGAGTCGATCATGTGCATAGAATAGAAGTAATGGACGAAAGTGAATCTCTTGAGCTTTTCAGTTGGCATGCATTCAAGCAATCAAGTCCCACAAAAGATTTTGCTACACATTCAATAGATGTGATTGCTTATTCTGGGGGACTGCCACTAGCACTTCAAGTCCTTGGGTCTTATTTGTCTGACTGTGAAATACCAGTGTGGCAGAAAGTTTTGGAAAAACTAAAATGTATCCCCAATAATGAAGTACATAAGAAGTTAAAAGTAAGTTTCGATGGCTTAAAAGATATCACAGAGAAACAAGCATTCCTTGATATAGTTTGTTTTTTTATTGGAATGGAGCGAAATGATGTAACACAAATATTAAATGGGTGCGGATATTTTGCTGATATTGGAATTAAAGTTCTTATAGAGCGAAGCCTTGTAACAGTTGACAATAGGAACAAGCTTCAAATGCATGATTTGTTAAGAGACATGGGAAGACAAATAATTTATGAGGAATCACCGTTTGATCTTGAGAAGCGCAGTAGGTTGTGGCGTCCTGAAGAAGTGTTTGATATACTATCAAAGTATACGGGAACAAAAGCTGTCAAGGGACTGGCTTTAGACTTTCCAACAAAAAACAAAGTTCGTATAGATACCAAAGCATTTAAGAAGATGAATAAACTCAGATTGCTTCAACTTGCTCGGGTACAACTTGATGGAGATTTTAATAATCTTTCAGGAGAACTTAGATGGCTCTACTGGCATGGTTTTCCATCAGCTTCTATTCCTGTAGAATTGCAAAAAGGAAGTCTAGTTGCTCTGGAGTTAAAATATAGTAATCTCAAATATACATGGAAGTGCTGCCAAAAGATGTTAGAGAATCTAAAAATTCTTAATCTTAGCCATTCTCTAGAATTGACTGAAACCCCAAACTTTAGTTACATGCCTAATTTGGAAAAGATAGTACTTAAAGACTGTCCAAGTTTATCTTCCGTCTCTTATACCATTGGAGATCTCGATAAACTTCTTCTTATAAACTTGACAGACTGCAGAGGTCTTGGGACACTTCCGAGAAGCATCTATGATTTAAAATCTCTAGAAACTTTGATTCTTTCTAGATGTTCCATGATCGACAAGTTAGAGGAGGATTTGGAACATATGAAATCGTTGACAACCTTAATTGCGGATAAGACTGCTATAACACAAGTGCCATTTTCAATAGTAAGATCTAAAAGCATTAAATATATTTCTTTACCTGGCTTTGAAGGATTTTCACGTGATGTATTTCCTTCTCTCATTCTGTCTTGGATGTCACCGTCAAATAATGTGGTATCCTTAGTTCAAACAGCCGGTTCCATGTCATCTATTGGTCTTTATGTGAAATGTGGTTCAAAACTGCAACTGTCTCAAGATGTAGCAAGAATTTTGGAAGCATTGAAAGCCACAAATTGTCAGAAATTGGAAGCAAGTGCAAGTTCAACTCCAGTACATATCTCTGATATCTATCCTTCTAGTTTGATTAACGATTACATTGGTCAAGCTTCCACTTCAAAGTCAAATAATTACTTGAAATCTTTCTTGATTCAAATGGGAATGAAACTCCACGCCACCAATATTGTCGAAGACAACATTTTACAGACTGCGGATGGAATTTGGAATCGAATTTTGCTCCCATGTTACAATATATCTGATTGGTCAACCTTCAGTAGTAAAGGTTGTTCTTTAATATTTGATGTCCCAACAATGAAAGGAAGTAACCTGAAGAATATGACGTTGTTCGTTGTCTATTACTCTTCCTCGGACAACATAGCATCAGAAGGTTGTCAAGGTGTGTTGATCATAAATTACACAAAGACAACCATTCAGGCCTATACAAAAGATGCACTTACCTCCTTTGAGGATGAAGATTGGAAGAGCATAACATCAAATCTAGAATCTGGTAACAATGTAGAGATTATGGTTGTTTTGAGGGAGGGATTCATTGTTGAGAAGACTACGATATCTCTCTTATATGATGAACCGGTCGACAAAGAAATGGAACACTGCAATGCAATATTCGAGGAGAGTGTTATTGCTTTTAGTGACGATGATAAGAATGTTGGTGTTTCTGGTGGTGATAATATTGATGTCCCAATGGACGACATTGTTACCAGTTCAGAGCAAGATGAAGCTTTAAGTGATGATAAGCATGGGCAGGCAATGAGTAGAAAAAGAAAGTGA 4731 0.3746 MSSSITTYSKRKKTYDVYLSFSAKVPSTFVRKLHKALCTYVPRTRIFLDRTKLLSTNWETTPSESLLIIEKCKMVVILLSSIYMSSPSCLGELEKITECCLTTTDLVVLPVLYHFDQRFRGDMFRKAFHDFLDRIPIKKISPEEDNIMTWVEAITKSTQYPTDFIPTDRNECDCVKSVVERVIYALYKIRPALSSTFYTPSVKSGVQDVLQLLKQSKCPLVIGIWGIAGIGKTSIAKTIYDMIGPYFEGKCMLDNVSEVWERYTGPFSLQEELLFCVNNATGFEKETLKGNLQNKRVLLILDDVNKLEQLNSLCGSREWFGAGSKIIITTRDRHLLKEYGVDHIYTMKQLDQSESLEVFKWGAFGNETTLPEDFAELSRQVVAYSGGWPLALITLGRLLRGKEALQWKGVLWSLKNMSIPAPRLLNILEKSFNELSDNEKQTFLDIASFFIGKNQNDVLQTLNRSTQSPTLQVSLLQNKSLVTIDENNKLQMHVLLQAMARDIINRESRSRTIQPKMYDVFLSFRGEDSRAKFMSHLYSSLQDAGIYAFRDDDEIQHGDQISISLLRAIEQSRISIVVLTTNYANSRWCMLELERIIEISKANGLDVVPVFYEVDPSEVRHQEGQFGKAFEELRSTTSVNESTKTNWRRDLFDIGSKAGFVLKDSRNESEDVKNIVESVSRLLDRTELFVAEHPVGVESRVEATTKLLNIQKSEDVLILGIWGMGGMGKTTIAKAIYNQIGSKFEGKSFLLNIREIWETDTNQVSLQQQVLCDIYKTMTFKIRDIESGKNILKERLSQNRVLFVLDDVNEIDQINALCGSREWFGPGSRIIITTRDMHILNSCRVDHVHRIEVMDESESLELFSWHAFKQSSPTKDFATHSIDVIAYSGGLPLALQVLGSYLSDCEIPVWQKVLEKLKCIPNNEVHKKLKVSFDGLKDITEKQAFLDIVCFFIGMERNDVTQILNGCGYFADIGIKVLIERSLVTVDNRNKLQMHDLLRDMGRQIIYEESPFDLEKRSRLWRPEEVFDILSKYTGTKAVKGLALDFPTKNKVRIDTKAFKKMNKLRLLQLARVQLDGDFNNLSGELRWLYWHGFPSASIPVELQKGSLVALELKYSNLKYTWKCCQKMLENLKILNLSHSLELTETPNFSYMPNLEKIVLKDCPSLSSVSYTIGDLDKLLLINLTDCRGLGTLPRSIYDLKSLETLILSRCSMIDKLEEDLEHMKSLTTLIADKTAITQVPFSIVRSKSIKYISLPGFEGFSRDVFPSLILSWMSPSNNVVSLVQTAGSMSSIGLYVKCGSKLQLSQDVARILEALKATNCQKLEASASSTPVHISDIYPSSLINDYIGQASTSKSNNYLKSFLIQMGMKLHATNIVEDNILQTADGIWNRILLPCYNISDWSTFSSKGCSLIFDVPTMKGSNLKNMTLFVVYYSSSDNIASEGCQGVLIINYTKTTIQAYTKDALTSFEDEDWKSITSNLESGNNVEIMVVLREGFIVEKTTISLLYDEPVDKEMEHCNAIFEESVIAFSDDDKNVGVSGGDNIDVPMDDIVTSSEQDEALSDDKHGQAMSRKRK 1576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00854 1576 Gene3D - 513 690 IPR035897 -
Vivi5g00854 1576 Gene3D - 8 189 IPR035897 -
Vivi5g00854 1576 MobiDBLite consensus disorder prediction 1539 1576 - -
Vivi5g00854 1576 FunFam Disease resistance protein (TIR-NBS-LRR class) 514 685 - -
Vivi5g00854 1576 Pfam TIR domain 518 681 IPR000157 GO:0007165
Vivi5g00854 1576 Pfam TIR domain 15 156 IPR000157 GO:0007165
Vivi5g00854 1576 Gene3D - 349 436 IPR042197 -
Vivi5g00854 1576 Gene3D - 853 937 IPR042197 -
Vivi5g00854 1576 SMART till_3 14 160 IPR000157 GO:0007165
Vivi5g00854 1576 SMART till_3 517 657 IPR000157 GO:0007165
Vivi5g00854 1576 SMART AAA_5 218 351 IPR003593 GO:0016887
Vivi5g00854 1576 SMART AAA_5 715 855 IPR003593 GO:0016887
Vivi5g00854 1576 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 206 446 IPR027417 -
Vivi5g00854 1576 SUPERFAMILY Toll/Interleukin receptor TIR domain 509 658 IPR035897 -
Vivi5g00854 1576 PRINTS Disease resistance protein signature 718 733 - -
Vivi5g00854 1576 PRINTS Disease resistance protein signature 795 809 - -
Vivi5g00854 1576 PRINTS Disease resistance protein signature 888 902 - -
Vivi5g00854 1576 PRINTS Disease resistance protein signature 1198 1214 - -
Vivi5g00854 1576 Gene3D - 691 852 IPR027417 -
Vivi5g00854 1576 ProSiteProfiles TIR domain profile. 516 683 IPR000157 GO:0007165
Vivi5g00854 1576 ProSiteProfiles TIR domain profile. 13 162 IPR000157 GO:0007165
Vivi5g00854 1576 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 518 1345 IPR044974 GO:0006952
Vivi5g00854 1576 Gene3D Ribonuclease Inhibitor 1034 1352 IPR032675 -
Vivi5g00854 1576 Pfam NB-ARC domain 699 923 IPR002182 GO:0043531
Vivi5g00854 1576 Pfam NB-ARC domain 206 417 IPR002182 GO:0043531
Vivi5g00854 1576 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 682 948 IPR027417 -
Vivi5g00854 1576 Gene3D - 190 343 IPR027417 -
Vivi5g00854 1576 SUPERFAMILY "Winged helix" DNA-binding domain 424 509 IPR036390 -
Vivi5g00854 1576 SUPERFAMILY L domain-like 993 1271 - -
Vivi5g00854 1576 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 138 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00854 Vivi-Chr5 16366979 16374235 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00854 69 511 WRKY Transcription Factor Family AT4G12020 29.956 2.37e-37 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00854 - - vvo:131601411 3102.38