Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00847 ATGTCTCTGTGCCATCTTAATCTCCCATTCGCATCCGATGCGGCACCTATCCCCTCCACATTTCACTCTCCTAATTCTTCTCCTACCAAAAAGGTCACTTTTTCAAGTATTCCGCGGCGCACCTGTGTAGTAAGGTCTCATATGACAATGGAAGCGAAGCCTCTCTCTCAAAACAATCGAATGCTTGTGTATGTGCCTGCTCATCCTTTGATCAAGCACTGGGTTTCGGTTCTCAGGAATGAGCAAACTCCGTGTCCCATTTTCAGAAATGCAATGGCTGAGTTGGGAAGGCTACTAATTTATGAAGCCTCAAGGGATTGGCTGCCAACAGTGACCGGAGAGATTCAATCACCGCTGGGTGTCGCCTCGGTGGAGTTCATTGATCCAAGGGAGCCTGTGGCTGTAATTCCAATTTTGAGAGCTGGTCTTGCTCTTGCTGAACATGCATCATCAGTCTTGCCTGCTACAAAAACATATCATTTAGGAATGAGCAGAGATGAGGAAACTCTTCAGCCAACTGTATATTTGAACAAGCTACCTGAAAAATTTGCAGAAGGGTCTAAAATATTCGTGGTTGATCCTATGCTGGCCACAGGTGGTACTATAGTCGCGGCCCTGAATATCTTAAAGGATCGCGGAGTTACCAACAAGCAGATTAAAGTGATATCTGCATGTGCTTCCCCTCCAGCTCTCGAAAAGCTGAGCAACCAGTTCCCGGGCCTTGAAGTGTATACCGGAATAATTGATCCCGTACTTAATGAGAAAGGGTTTATAATTCCTGGCCTCGGAGATGCTGGTGATCGCAGCTATGGTACATGA 819 0.464 MSLCHLNLPFASDAAPIPSTFHSPNSSPTKKVTFSSIPRRTCVVRSHMTMEAKPLSQNNRMLVYVPAHPLIKHWVSVLRNEQTPCPIFRNAMAELGRLLIYEASRDWLPTVTGEIQSPLGVASVEFIDPREPVAVIPILRAGLALAEHASSVLPATKTYHLGMSRDEETLQPTVYLNKLPEKFAEGSKIFVVDPMLATGGTIVAALNILKDRGVTNKQIKVISACASPPALEKLSNQFPGLEVYTGIIDPVLNEKGFIIPGLGDAGDRSYGT 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00847 272 Gene3D - 48 272 IPR029057 -
Vivi5g00847 272 FunFam Uracil phosphoribosyltransferase 60 272 - -
Vivi5g00847 272 CDD PRTases_typeI 128 248 IPR000836 -
Vivi5g00847 272 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 64 249 - -
Vivi5g00847 272 Pfam Uracil phosphoribosyltransferase 65 272 - -
Vivi5g00847 272 SUPERFAMILY PRTase-like 63 271 IPR029057 -
Vivi5g00847 272 NCBIfam uracil phosphoribosyltransferase 63 272 IPR005765 GO:0004845|GO:0006223
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00847 Vivi-Chr5 16206429 16209974 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00847 16 272 PRT Gene Family AT3G53900 68.966 8.18e-133 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00847 K00761 - gmx:100797537 438.728