Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00832 ATGATGAGGATGAAGAAAATGACTATGCATATGAGTCTCTATTGGGGAAAAGATGCTGTAGTACTTTTCCCTGGGTGGCCTAATGAGAGTGTAGGCATGTATATTTTAGCTTTCTGTTTTGTGTTTTTCCTTGCTTTGGTTGTTGAGTTTTTGCCTAACAAACCCACCATCAAGCAAGGGACAAATCACATTAAGGGAGGGTTGATTCAAGCTAGTATTTACTTTTTTCGTATAAGTTTTCTTTACTTGGTTATGCTGGCTGTTATGTCTTTCAATATAGGAATCTTCATTGCTGCTGTTGCTGGTCATACTTTGGGTTTCTTTTTTGTCAAGTCTCATGCTATTTCTGCTGCCAACAAAGAACTAAAGCATGAATCCGCCGTGAGTATCGATGAAATTTAG 402 0.3806 MMRMKKMTMHMSLYWGKDAVVLFPGWPNESVGMYILAFCFVFFLALVVEFLPNKPTIKQGTNHIKGGLIQASIYFFRISFLYLVMLAVMSFNIGIFIAAVAGHTLGFFFVKSHAISAANKELKHESAVSIDEI 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00832 133 Pfam Ctr copper transporter family 11 51 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vivi5g00832 133 Pfam Ctr copper transporter family 59 109 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vivi5g00832 133 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 2 117 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00832 Vivi-Chr5 15985135 15985925 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00832 12 123 Inorganic Solute Cotransporters AT5G59030 44.348 9.53e-30 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00832 K14686 - gmx:100808693 171.785