Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00831 ATGATGCAAACTCTAGGAAAAATATTTCTAGGCAAGGGCACGCCGATAAGACATGTATTGGGTAAAAGCAAGATGTTATTGGGCTTGCTAGAAGGAATTCCAACAATGTTGAAGAGTGAAGTGGCAATGTTGAAGATGAAACCTCAGCTGCATTATGGTGAGGATGATTGTCCTATTTCTGCTCCTGATGGGTTTCCTAAGGATGATGAACTCCATTTTGAAATAGAGCTGATAGAGTTTTTCAAGGCCAAGGTTGTCACTGAAGATTTGGAAGTGATTAAAAAGGTTGTATGCGAAGGGCAGGGTTGGGAATCTCCAAGAGAACCTTATGAAGTGAAAGCTTGGGTTTCAGCGAAGACAGCTAGTGGGAAATTGATCATGTCACAGAAAGACGGAGAACCATACTTCTTTACATTTGGAAAATCTGAGGTACCTAAAGGTCTTGAAATGGGGATCGGAACAATGGTTCGGGAAGAAAAAGCTGTTATATATGTTACAAGTCAGTATTTAACTGAGTCTCCTCTGATGCCTGTTATAGAAGATTCTGAAGTCCAGTTTGAAGTGGAGCTTGTTCACTTTATTCAAGTGAGGGACGTGCTTGGAGATGGGCGTCTTATAAAACGTCGGGTTCGTGATGGAAAAGGTGACTTTCCAATGGATTGCCCCCTTCATGACAGTCTACTTCATGTTCATTACAAGGGCACTGTTCTCGGTGAAGAAAAGAGGGTGTTCTATGATACGAGAGTTGATAACGATGGTCAACCATTGGATTTCTGCTCTGGAGAAGGGCTTGTACCAGAGGGATTTGAATTGTGTGTTCGTCTGATGCTACCAGGAGAGGTGGCTCTAGTCACATGTCCACCAGACTATGCTTATGATAAGTTTACAAGGCCTTCAAATGTCCCTGAGGGTGCTCATATTCAGTGGGAAATTGAACTTCTATCTTTTGAAATGCCAAAGGACTGGACGGGAATGGACTTTAAAAGTATAATGTACGAAGCTGAAAATATCAGAAACAAGGGTAACAGGTTATTCAAAGAAGGAAAATATGAACTTGCAAAGGCAAAGTATGACAAGGTGCTTCGAGAATTTAATCATGTTAATCCACAAGATGACGATGAAGGAAAAGTTTTTTCAGATACACGTAATTTGCTACACCTGAATGTTGCTGCATGCTATCTAAAGCTGGGAGAATGCAGAAAGTCCATTGAGACTTGTAATAAGGTTTTAGAAGCGAATCCTGCGCACGTCAAGGGTCTTTATCGTCGTGGAATGGCCTACATGGCTAATGGAGATTTTGATGAAGCAAGGGCTGATTTCAAAATGATGATGAAAGTCGATAAGTCAACTGCATCAGACGCATCAGCAGCCCTTATAAAACTTAAGCAGAAAGAGCAGGAAGTTGAGAATAAAGCTCGGAAACAATTTAAAGGGCTATTTGACAAGAAGCCTGGAGAAATTGCAGAAGTTAATGCCAATGAAGATGGAGATCATCAGGTCACCAGGGAAAGCCAGAAAGATGGTGAGGTACGGGAAGACGCATCAGATGGAACAAATTCAGAGGATTCACATGAAGCTGTGCCTGATGTAGACCAAAGGGGTTGGTTCTCTCACTTTTGGCCAACCGGTAGTAGAATTTTTTCGTCTCTTGGGCTTCAAAGATGTACCATACTATAA 1677 0.4168 MMQTLGKIFLGKGTPIRHVLGKSKMLLGLLEGIPTMLKSEVAMLKMKPQLHYGEDDCPISAPDGFPKDDELHFEIELIEFFKAKVVTEDLEVIKKVVCEGQGWESPREPYEVKAWVSAKTASGKLIMSQKDGEPYFFTFGKSEVPKGLEMGIGTMVREEKAVIYVTSQYLTESPLMPVIEDSEVQFEVELVHFIQVRDVLGDGRLIKRRVRDGKGDFPMDCPLHDSLLHVHYKGTVLGEEKRVFYDTRVDNDGQPLDFCSGEGLVPEGFELCVRLMLPGEVALVTCPPDYAYDKFTRPSNVPEGAHIQWEIELLSFEMPKDWTGMDFKSIMYEAENIRNKGNRLFKEGKYELAKAKYDKVLREFNHVNPQDDDEGKVFSDTRNLLHLNVAACYLKLGECRKSIETCNKVLEANPAHVKGLYRRGMAYMANGDFDEARADFKMMMKVDKSTASDASAALIKLKQKEQEVENKARKQFKGLFDKKPGEIAEVNANEDGDHQVTRESQKDGEVREDASDGTNSEDSHEAVPDVDQRGWFSHFWPTGSRIFSSLGLQRCTIL 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00831 558 SMART tpr_5 417 450 IPR019734 GO:0005515
Vivi5g00831 558 SMART tpr_5 383 416 IPR019734 GO:0005515
Vivi5g00831 558 SMART tpr_5 334 367 IPR019734 GO:0005515
Vivi5g00831 558 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 109 194 IPR001179 GO:0003755
Vivi5g00831 558 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 225 317 IPR001179 GO:0003755
Vivi5g00831 558 Coils Coil 451 474 - -
Vivi5g00831 558 Gene3D Tetratricopeptide repeat domain 328 482 IPR011990 GO:0005515
Vivi5g00831 558 Pfam Tetratricopeptide repeat 418 441 IPR013105 -
Vivi5g00831 558 ProSiteProfiles TPR repeat profile. 417 450 IPR019734 GO:0005515
Vivi5g00831 558 SUPERFAMILY FKBP-like 13 87 - -
Vivi5g00831 558 Gene3D - 82 194 IPR046357 GO:0003755
Vivi5g00831 558 PANTHER INACTIVE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP6 84 195 - -
Vivi5g00831 558 SUPERFAMILY FKBP-like 199 326 - -
Vivi5g00831 558 FunFam Peptidylprolyl isomerase 195 319 - -
Vivi5g00831 558 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 1 81 IPR001179 GO:0003755
Vivi5g00831 558 FunFam Peptidylprolyl isomerase 322 478 - -
Vivi5g00831 558 SUPERFAMILY TPR-like 332 471 IPR011990 GO:0005515
Vivi5g00831 558 FunFam Peptidylprolyl isomerase 85 194 - -
Vivi5g00831 558 Gene3D - 4 81 IPR046357 GO:0003755
Vivi5g00831 558 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 7 78 IPR001179 GO:0003755
Vivi5g00831 558 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 106 191 IPR001179 GO:0003755
Vivi5g00831 558 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 226 314 IPR001179 GO:0003755
Vivi5g00831 558 SUPERFAMILY FKBP-like 86 193 - -
Vivi5g00831 558 Gene3D - 195 321 IPR046357 GO:0003755
Vivi5g00831 558 MobiDBLite consensus disorder prediction 491 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00831 Vivi-Chr5 15974119 15985040 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00831 12 482 Calmodulin-binding Proteins AT5G48570 29.876 1.80e-56 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00831 - - tpra:123919523 1005.36