Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00822 ATGGCTGAAGTTCAATTGTTGGGTGTAAGAGGAAGCCCATTTGTTCAAAGAGTGCAATATGCTCTAAAACTAAAGGGCATTGAGTACACTTTCATTGAAGAAAATCTAAGAAACAAAAGTGACCTTCTTCTTAAGTACAACCCTATTCATAAGAAAGTGCCTGTATTTGTCCACAATGGAAAACCATTATCTGAGTCACTTGTGATCATTGAATACATTGATGAAACTTGGGAGAATTATCACATTTTTCCGCAACAAGCTCATGAGAAAGCCTTAGCTAGGTTTTGGTCTAAGTTCATTGATGACAAGATCTTGCCGGCGATATCGAAGGCAGCATGGACAGTGAACAAAGAGGAAAGAGAGAAAGGCACTGAAGAAGCATTGCAGGGTCTACAATTTCTTGAGAATGAACTCAAGAGCAAATTCTTTGGTGGAGAAAATATTAATATTGTGGACATTGCTGCTTCCTATTTATCTTTTTGGCTTCCTACCCTTGAAGAAGCTGTTGGATTGAAGTTGCTTGGTGCTGACAAGTTTCCTAAGCTCCATAAATGGAGTCAAGAGTTCATCAATCAACCTATTGTGAAAGAGATTCTTCCTGCTAGAGAGGGACTATTAGGGTTTTTCAAATCTCGATATGCCGCGATTAGTGCTGCTGCGAATTAG 666 0.3919 MAEVQLLGVRGSPFVQRVQYALKLKGIEYTFIEENLRNKSDLLLKYNPIHKKVPVFVHNGKPLSESLVIIEYIDETWENYHIFPQQAHEKALARFWSKFIDDKILPAISKAAWTVNKEEREKGTEEALQGLQFLENELKSKFFGGENINIVDIAASYLSFWLPTLEEAVGLKLLGADKFPKLHKWSQEFINQPIVKEILPAREGLLGFFKSRYAAISAAAN 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00822 221 Gene3D - 86 220 - -
Vivi5g00822 221 FunFam Tau class glutathione S-transferase 83 219 - -
Vivi5g00822 221 CDD GST_N_Tau 4 77 - -
Vivi5g00822 221 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Vivi5g00822 221 SUPERFAMILY Thioredoxin-like 4 104 IPR036249 -
Vivi5g00822 221 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 213 IPR010987 -
Vivi5g00822 221 Gene3D Glutaredoxin 1 85 - -
Vivi5g00822 221 Pfam Glutathione S-transferase, N-terminal domain 3 75 IPR004045 -
Vivi5g00822 221 SFLD Main.3: Omega- and Tau-like 1 219 IPR045073 -
Vivi5g00822 221 SFLD Glutathione Transferase (cytosolic) 1 219 IPR040079 -
Vivi5g00822 221 CDD GST_C_Tau 87 212 IPR045074 GO:0004364|GO:0006749
Vivi5g00822 221 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 7 202 IPR045073 -
Vivi5g00822 221 SUPERFAMILY GST C-terminal domain-like 75 213 IPR036282 -
Vivi5g00822 221 FunFam Tau class glutathione S-transferase 1 85 - -
Vivi5g00822 221 Pfam Glutathione S-transferase, C-terminal domain 95 193 IPR004046 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00822 Vivi-Chr5 15862285 15863609 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00822 4 218 Glutathione S-transferase Gene Family AT3G09270 50.000 1.55e-78 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00822 K00799 - gmx:100819805 324.709