Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00821 ATGGGTTCTACAAATCAAGAAGAAGTGAGGCTATTAGGAAAATGGGCAAGTCCATTTAGCAACCGAATAGATCTTGCTTTGAAACTCAAAGGTGTTCCATACGAATACTCTGAGGAAAATCTACCTATTAAAAGTGAAGATCTTCTCAAGTACAATCCTGTTTACAAGAAGGTACCTGTTCTTGTTCACAATGGAAATCCAATTGCTGAGTCACTTGTCATTCTTGAGTATATTGATGAGACATGGACAAATAATTCTCTTTTGTCTCAAGATCCTTATGAGAGAGGTTTGGCTCGGTTTTGGGCTAAGACTCTAGATGACAAGATCTTGCCTGCGATATGGAATGCATGCCGGGGTGCTGAAAAGGGAAGTGAAAAATCTGTGGAAGAAGCCTTTGAAGCTCTAAAGCTACTAGAAGATGAAATCAAAGACAAGAAATTCTTTGGTGGAGAAACCATAGGACTTGTTGATATTGCTGCAAGTTTCATAGGTTATTGGGTTGATATATTACAAGAAATTGCTGGATTAAAGTTACTTACTATTGAGAAATTTCCAAAGGTGTTTAAATGGAGTCAAGAATTTATCAATCACCCTGTTATCAAAGAAGGGTTGCCTCCAAGAGATAAACTATTTGCTTTTTTTAAAGCCTCAGCTCCAAAATAG 663 0.3725 MGSTNQEEVRLLGKWASPFSNRIDLALKLKGVPYEYSEENLPIKSEDLLKYNPVYKKVPVLVHNGNPIAESLVILEYIDETWTNNSLLSQDPYERGLARFWAKTLDDKILPAIWNACRGAEKGSEKSVEEAFEALKLLEDEIKDKKFFGGETIGLVDIAASFIGYWVDILQEIAGLKLLTIEKFPKVFKWSQEFINHPVIKEGLPPRDKLFAFFKASAPK 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00821 220 CDD GST_C_Tau 92 216 IPR045074 GO:0004364|GO:0006749
Vivi5g00821 220 SUPERFAMILY Thioredoxin-like 9 109 IPR036249 -
Vivi5g00821 220 FunFam Tau class glutathione S-transferase 88 220 - -
Vivi5g00821 220 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 12 210 IPR045073 -
Vivi5g00821 220 SFLD Main.3: Omega- and Tau-like 5 217 IPR045073 -
Vivi5g00821 220 CDD GST_N_Tau 9 82 - -
Vivi5g00821 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 219 IPR010987 -
Vivi5g00821 220 Pfam Glutathione S-transferase, N-terminal domain 8 80 IPR004045 -
Vivi5g00821 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 7 86 IPR004045 -
Vivi5g00821 220 SUPERFAMILY GST C-terminal domain-like 80 217 IPR036282 -
Vivi5g00821 220 Gene3D Glutaredoxin 3 87 - -
Vivi5g00821 220 FunFam Tau class glutathione S-transferase 3 90 - -
Vivi5g00821 220 Pfam Glutathione S-transferase, C-terminal domain 101 198 IPR004046 -
Vivi5g00821 220 SFLD Main (cytGST) 5 217 - -
Vivi5g00821 220 Gene3D - 88 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00821 Vivi-Chr5 15854542 15856529 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00821 5 216 Glutathione S-transferase Gene Family AT3G09270 59.535 3.15e-89 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00821 K00799 - gmx:547582 364.385