Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00814 ATGGCGGTTGCACTCTATAACCTTAAGTCTGAATCCGGTTTGAAGAAGCTCAATGAGTACCTTCTCACACGCAGTTATATCACTGGATACCAAGCTTCAAAGGATGATATCACTGTTTATTCCGCTTTGCCATCAGTTCCATCCTCTGAATATGAGAATGTTGCTAGGTGGTTCAAGCACATTGATGCTTTATTGAGAATTTCTGGTGTTTCTGGTGAGGGATCTGGTGTCACTGTTGAATCTTCTCTAGTTGCTGAAGAGGCTGTTGCCACTCCTCCAGCTGCTGACACAAAGGCTACTGAAGCTGAGGACGACGATGATGACGATGTGGATTTGTTTGGTGAAGAGACTGAGGAAGAAAAGAAGGCAGCTGAGGAACGGGCAGCAGCCGTGAAGGCGTCTGGCAAAAAGAAAGAGAGTGGGAAATCATCGGTATTGTTGGATGTGAAGCCATGGGATGATGAAACCGACATGAAGAAGCTTGAAGAAGCAGTGAGATCTGTTCAGTTGGATGGATTGTTATGGGGTGCATCCAAACTTGTTCCAGTTGGATATGGTATCAAGAAACTTCAAATTATGATGACAATTGTGGATGACTTGGTTTCTGTTGACAATATGGTTGAGGACTACCTTACCGTCGAGCCCATCAATGAGTATGTCCAGAGTTGTGACATTGTTGCCTTCAACAAAATATAA 696 0.4397 MAVALYNLKSESGLKKLNEYLLTRSYITGYQASKDDITVYSALPSVPSSEYENVARWFKHIDALLRISGVSGEGSGVTVESSLVAEEAVATPPAADTKATEAEDDDDDDVDLFGEETEEEKKAAEERAAAVKASGKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVQLDGLLWGASKLVPVGYGIKKLQIMMTIVDDLVSVDNMVEDYLTVEPINEYVQSCDIVAFNKI 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00814 231 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 220 231 IPR001326 GO:0003746|GO:0005853|GO:0006414
Vivi5g00814 231 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 8 231 - -
Vivi5g00814 231 SMART EF1_GNE_2 142 231 IPR014038 GO:0003746|GO:0006414
Vivi5g00814 231 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 106 114 IPR001326 GO:0003746|GO:0005853|GO:0006414
Vivi5g00814 231 SUPERFAMILY GST C-terminal domain-like 8 67 IPR036282 -
Vivi5g00814 231 FunFam Elongation factor 1-delta 1 3 78 - -
Vivi5g00814 231 Gene3D - 135 231 IPR014717 -
Vivi5g00814 231 SUPERFAMILY eEF-1beta-like 139 231 IPR036219 -
Vivi5g00814 231 CDD EF1B 140 231 IPR014038 GO:0003746|GO:0006414
Vivi5g00814 231 Pfam EF-1 guanine nucleotide exchange domain 144 231 IPR014038 GO:0003746|GO:0006414
Vivi5g00814 231 Gene3D - 3 79 - -
Vivi5g00814 231 FunFam Elongation factor 1-beta 1 like 136 231 - -
Vivi5g00814 231 Coils Coil 114 134 - -
Vivi5g00814 231 MobiDBLite consensus disorder prediction 87 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00814 Vivi-Chr5 15609928 15611806 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00814 4 231 Eukaryotic Initiation Factors Gene Family AT2G18110 81.659 2.60e-116 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00814 K03232 - nnu:104610217 309.686