Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00807 ATGGCTCCCGAAATCATGCAACTGCAGAAGTATGATGCCAAGGCAGATCTCTGGAGTGTTGGAGCAATCTTATATCAGTTTGTTACAGGGAAAACACCTTTTACTGGAAACAATCAAATCCAGCTACTACAGAATATTATGAAATCAACAGAATTGCAATTTCCACCTGATAGTCAAGGTTTGTGTTCTGAGTGCAGAGATTTGTGCCAGAAATTACTACGCCGTAATCCAGTGGAACGTCTAACTTTTGAAGAATTCTTTAACCACCCATTCCTCAATCCAAAGCAAAGAGAACAGGATGAATCATTAAGGAATAAAAGCTCTTCAAGGTTGGTAAGTGGGTTCTCTTCAACAGTGACCGATCCTTTGAGAAGAACTGAGGAAAATTATCAAGAGGATTGCTTACCTTTCATTCTAGATGATGAATCTAGTAGACCTGAAGGGAGTACGTTGCATTCAAAGAAGAAGTCCTCCATGAAGTCTACCTTTGGATTTGATCTAAATGCCAAACTAGAGTCAACTTCCATTTCTAATAATGTAACTTATGCTTCCAGATATAATAGTGTAACACAAAGACCTGAAATCACTTCTAAAAGATTGGACAACCATAAAATTTCAGGAAGAAATCTCACCAATCCTCTAGGATCACCAGACAAGATATTTGCAAACCCTTATCCAAAAGTTACAGATTCACTTGAGAATATTGATCAAGAATATGTTCTTGTGTCTGGCCCCCCTATGGATGTTTCATCTTCTTCAGCAAATGCTTCAAAGCCCGGCCATTCCTTCTTTAGGACAGGTAGTTTCCCCCAAGAGTCTTCTAATACAATCACTAGATTGAGTGGCCCAATGCCAATCGTTGGTGCATCTACCAATAGCATGTGCCAAATTGGAAGTTCAGGTAGTCAGGACTCTGCTCCTGGGACATCACATGGATCAATGGATACAGCTGATGAACAACCATCAACTAACTGTATGACAAGGGTGAAATCACTGCAAGATTATGCATCTGCCCTTAGAGAATTAGTTGATGAAAAGACTGTGGCAAGAAAGCAGTTAGAAGCATTTTCTATTGAGCTTGTGATTCTTGCCATTTGGAAGAAAGCACTGCACATGTGCCATACACAGGCTGCCTCCGCAATGGAAGGAAGTCCAAGTCAAGAAGCTTCAAGATATAGGAGGAGCACCAGCAAGAAGCTAGGTAGTCCCGATTCAGAAGAATGTCTTGATGAAAACACCCAAGGGCCGAAAGATTTATCATCTGAAATTGAAAGTGGATTTTTGAGGGAGTTTGAGCATGCCCAAGAACTTGCCAAGACCATTAAGCCTGGAAATACAGAGATGCCAGATGCAATGGAAACAATATTTCAAGCCGCCCTTGGTTTTGGGAAGCATGGTGGTGTCGAAGAGCTCTTGGGTAGTACAGAAAGTGCATCTACATTGTATTCAAAAGCCGTTCGTCTATTGGTTTTCCTTCTAGTGGAAGGACCGTCCCTGATTCTCAACCCTCCATTTTCATTGACAAAATCAGACCGTTACAGGCTTCGGAATTACATTGATATGCTTAATATCAGAGAAAGTTATACAAGGTCTCAGAGATCGACACTTCCAAAGGGTGATGATAGTCAGGGCATCTTTAAGGAAAAGTTTTAG 1653 0.4096 MAPEIMQLQKYDAKADLWSVGAILYQFVTGKTPFTGNNQIQLLQNIMKSTELQFPPDSQGLCSECRDLCQKLLRRNPVERLTFEEFFNHPFLNPKQREQDESLRNKSSSRLVSGFSSTVTDPLRRTEENYQEDCLPFILDDESSRPEGSTLHSKKKSSMKSTFGFDLNAKLESTSISNNVTYASRYNSVTQRPEITSKRLDNHKISGRNLTNPLGSPDKIFANPYPKVTDSLENIDQEYVLVSGPPMDVSSSSANASKPGHSFFRTGSFPQESSNTITRLSGPMPIVGASTNSMCQIGSSGSQDSAPGTSHGSMDTADEQPSTNCMTRVKSLQDYASALRELVDEKTVARKQLEAFSIELVILAIWKKALHMCHTQAASAMEGSPSQEASRYRRSTSKKLGSPDSEECLDENTQGPKDLSSEIESGFLREFEHAQELAKTIKPGNTEMPDAMETIFQAALGFGKHGGVEELLGSTESASTLYSKAVRLLVFLLVEGPSLILNPPFSLTKSDRYRLRNYIDMLNIRESYTRSQRSTLPKGDDSQGIFKEKF 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00807 550 MobiDBLite consensus disorder prediction 530 550 - -
Vivi5g00807 550 MobiDBLite consensus disorder prediction 291 325 - -
Vivi5g00807 550 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 1 459 IPR045269 GO:0004674|GO:0006914
Vivi5g00807 550 Pfam Protein kinase domain 1 92 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g00807 550 Gene3D Transferase(Phosphotransferase) domain 1 1 160 - -
Vivi5g00807 550 MobiDBLite consensus disorder prediction 378 419 - -
Vivi5g00807 550 MobiDBLite consensus disorder prediction 392 413 - -
Vivi5g00807 550 Coils Coil 339 359 - -
Vivi5g00807 550 SUPERFAMILY Protein kinase-like (PK-like) 1 112 IPR011009 -
Vivi5g00807 550 ProSiteProfiles Protein kinase domain profile. 1 92 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00807 Vivi-Chr5 15396890 15401949 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00807 1 111 EF-hand Containing Proteins AT4G23650 34.821 6.46e-15 75.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Vivi5g00807 Pkinase 6.3e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00807 K08269 - gmx:100791596 863.603