Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00806 ATGGCTCAAGCGCCGCCGGGACGGAGCAGTAGCAGTAGAGTGATCGGAGATTATGTAGTTGGGAGGCAAATTGGAGCCGGTTCGTTTTCGGTTGTGTGGCATGCGAGACACAAAGTTCATGGAACTGAAGTTGCTATCAAAGAGATCGCTACGTTGAGGCTTAACAAGAAGTTGCAGGAGAGTCTCATGTCGGAGATTTATATCTTGAAGAGGATTAATCATCCGAATATTATATCTTTGCACGATATCATTCAGGCTCCTGGGAAGATACATCTTGTGTTAGAGTATTGTAAAGGGGGAGATCTTTCTATGTACATTCAACGGCATGGAAGGGTACCGGAGGCAACTGCAAAGCATTTTATGCTTCAGCTTGCTGCTGGCCTTCAAGTTCTTCGGGACAATAACCTTATTCACCGAGATCTGAAACCACAGAATCTTCTTCTCTCCAGAAATGATGAGAAGTCAGTTTTGAAGATTGCTGACTTTGGATTTGCAAGATCTCTGCAACCGAGGGGCCTTGCAGAAACATTATGTGGTTCACCACTTTACATGGCTCCCGAAATCATGCAACTGCAGAAGTATGATGCCAAGGCAGATCTCTGGAGTGTTGGAGCAATCTTATATCAGTTTGTTACAGGGAAAACACCTTTTACTGGAAACAATCAAATCCAGCTACTACAGAATATTATGAAATCAACAGAATTGCAATTTCCACCTGATAGTCAAGGTTTGTGTTCTGAGTGCAGAGATTTGTGCCAGAAATTACTACGCCGTAATCCAGTGGAACGTCTAACTTTTGAAGAATTCTTTAACCACCCATTCCTCAATCCAAAGCAAAGAGAACAGGATGAATCATTAAGGAATAAAAGCTCTTCAAGGTTGGTAAGTGGGTTCTCTTCAACAGTGACCGATCCTTTGAGAAGAACTGAGGAAAATTATCAAGAGGATTGCTTACCTTTCATTCTAGATGATGAATCTAGTAGACCTGAAGGGAGTACGTTGCATTCAAAGAAGAAGTCCTCCATGAAGTCTACCTTTGGATTTGATCTAAATGCCAAACTAGAGTCAACTTCCATTTCTAATAATGTAACTTATGCTTCCAGATATAATAGTGTAACACAAAGACCTGAAATCACTTCTAAAAGATTGGACAACCATAAAATTTCAGGAAGAAATCTCACCAATCCTCTAGGATCACCAGACAAGATATTTGCAAACCCTTATCCAAAAGTTACAGATTCACTTGAGAATATTGATCAAGAATATGTTCTTGTGTCTGGCCCCCCTATGGATGTTTCATCTTCTTCAGCAAATGCTTCAAAGCCCGGCCATTCCTTCTTTAGGACAGGTAGTTTCCCCCAAGAGTCTTCTAATACAATCACTAGATTGAGTGGCCCAATGCCAATCGTTGGTGCATCTACCAATAGCATGTGCCAAATTGGAAGTTCAGGTAGTCAGGACTCTGCTCCTGGGACATCACATGGATCAATGGATACAGCTGATGAACAACCATCAACTAACTGTATGACAAGGGTGAAATCACTGCAAGATTATGCATCTGCCCTTAGAGAATTAGTTGATGAAAAGACTGTGGCAAGAAAGCAGTTAGAAGCATTTTCTATTGAGCTTGTGATTCTTGCCATTTGGAAGAAAGCACTGCACATGTGCCATACACAGGCTGCCTCCGCAATGGAAGGAAGTCCAAGTCAAGAAGCTTCAAGATATAGGAGGAGCACCAGCAAGAAGCTAGGTAGTCCCGATTCAGAAGAATGTCTTGATGAAAACACCCAAGGGCCGAAAGATTTATCATCTGAAATTGAAAGTGGATTTTTGAGGGAGTTTGAGCATGCCCAAGAACTTGCCAAGACCATTAAGCCTGGAAATACAGAGATGCCAGATGCAATGGAAACAATATTTCAAGCCGCCCTTGGTTTTGGGAAGCATGGTGGTGTCGAAGAGCTCTTGGGTAGTACAGAAAGTGCATCTACATTGTATTCAAAAGCCGTTCGTCTATTGGTTTTCCTTCTAGTGGAAGGACCGTCCCTGATTCTCAACCCTCCATTTTCATTGACAAAATCAGACCGTTACAGGCTTCGGAATTACATTGATATGCTTAATATCAGAGAAAGTTATACAAGGTCTCAGAGATCGACACTTCCAAAGGGTGATGATAGTCAGGGCATCTTTAAGGAAAAGTTTTAG 2202 0.4192 MAQAPPGRSSSSRVIGDYVVGRQIGAGSFSVVWHARHKVHGTEVAIKEIATLRLNKKLQESLMSEIYILKRINHPNIISLHDIIQAPGKIHLVLEYCKGGDLSMYIQRHGRVPEATAKHFMLQLAAGLQVLRDNNLIHRDLKPQNLLLSRNDEKSVLKIADFGFARSLQPRGLAETLCGSPLYMAPEIMQLQKYDAKADLWSVGAILYQFVTGKTPFTGNNQIQLLQNIMKSTELQFPPDSQGLCSECRDLCQKLLRRNPVERLTFEEFFNHPFLNPKQREQDESLRNKSSSRLVSGFSSTVTDPLRRTEENYQEDCLPFILDDESSRPEGSTLHSKKKSSMKSTFGFDLNAKLESTSISNNVTYASRYNSVTQRPEITSKRLDNHKISGRNLTNPLGSPDKIFANPYPKVTDSLENIDQEYVLVSGPPMDVSSSSANASKPGHSFFRTGSFPQESSNTITRLSGPMPIVGASTNSMCQIGSSGSQDSAPGTSHGSMDTADEQPSTNCMTRVKSLQDYASALRELVDEKTVARKQLEAFSIELVILAIWKKALHMCHTQAASAMEGSPSQEASRYRRSTSKKLGSPDSEECLDENTQGPKDLSSEIESGFLREFEHAQELAKTIKPGNTEMPDAMETIFQAALGFGKHGGVEELLGSTESASTLYSKAVRLLVFLLVEGPSLILNPPFSLTKSDRYRLRNYIDMLNIRESYTRSQRSTLPKGDDSQGIFKEKF 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00806 733 MobiDBLite consensus disorder prediction 575 596 - -
Vivi5g00806 733 Coils Coil 522 542 - -
Vivi5g00806 733 ProSiteProfiles Protein kinase domain profile. 18 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g00806 733 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Vivi5g00806 733 Pfam Protein kinase domain 18 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g00806 733 FunFam Non-specific serine/threonine protein kinase 5 98 - -
Vivi5g00806 733 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Vivi5g00806 733 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 9 642 IPR045269 GO:0004674|GO:0006914
Vivi5g00806 733 FunFam Serine/threonine-protein kinase ATG1 10 316 - -
Vivi5g00806 733 CDD STKc_ATG1_ULK_like 24 274 - -
Vivi5g00806 733 MobiDBLite consensus disorder prediction 713 733 - -
Vivi5g00806 733 SUPERFAMILY Protein kinase-like (PK-like) 14 276 IPR011009 -
Vivi5g00806 733 SMART serkin_6 18 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g00806 733 MobiDBLite consensus disorder prediction 474 508 - -
Vivi5g00806 733 Gene3D Transferase(Phosphotransferase) domain 1 8 344 - -
Vivi5g00806 733 MobiDBLite consensus disorder prediction 561 602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00806 Vivi-Chr5 15395270 15401949 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00806 14 275 CBL-interacting serine-threonine protein kinases AT2G30360 35.821 7.91e-52 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Vivi5g00806 Pkinase 1.8e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00806 K08269 - gmx:100791596 1187.94