Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00764 ATGGGGTGTTTTCCTATATTGAAGAGAAAGAAGAAAAAGTCTGATCAGATTGTGTATGTAAAACGCGTAAGCCCTGGCGAGGATTCTCCAACAGTACTGCCTGAACCTCAAACTCATACTCGTTCACTCCAGTCAGCGCCTCCTAGTTTTAAGATCAGAGTGAAACCTATTCAAACCAGTGTTAGAGTCAATAACAATAGAATACGAGCATTGTCTGCTCCATCATCTCTCGATGAAGCAGACCAAGATGCTTTGGTCTCAATTGAATATGAGGAAGAAGAGCCAAAATATCGAGCTGCATCAGTGAAGGAGCAGCGTTCGCCTAGTCCACAGCCTTTACCGCTTCCATCTCCCAAGGGTGGTGGTACGCTGAAGGCTATTGGGAGCTTTAAGTTGGGGACAGCTAGTGGTCCCTTATATGCTTCTGGACCTCTGCCGCTTCCACCAACTGGGTCACTTAGAAATTTTTCTTACGACGAGCTTGCTGCTGCTTGCCACAATTTCTCTTCAGATCGATACATGTCAGAATCTCTTTCGTCCACCATCTATAAAGCTTCCTTTGGTGACGATGCTTCAAGTTCAAAAAAGTTTGAAGCCACGGTCACACGCCTTCGCCCATCAAATCAGGGCTTGAAGGAATTCATAAATGAGGTTAATACTCTTGCATCTTTGCGGCATCCAAACCTCTGTAGAGTACTAGGATTTCACGCTCGTGATGGTTCGGAACATAGAATGTTGGTTTATGAGAAGCTACACCATGGAAGCTTGGACCGCCTATTGTATGGGAGATCTGATGGACCATCAATTGATTGGAATACAAGAATGAAAATTGCAATATGTGCTGCACTAGGTCTTTCTTTCTTGCATGAAGAAGGGCCTTTTCAGGCAATGTATAATGAATTCTCAACTGCCAACATACAGATTGACAAAGATTTCAGTGCAAAGCTTTCAGGGTATGGCTGTGTTGGACATGTTCCCAAGGAAGAGATTTCAAGCAGTTCATCTGCCGTTGGAAACCTATCCATGGAGACACTTGAGAAAGGATTGCTCACTCCAAAAAGCAACGTATGGAGTTTTGGAATTTTTCTTCTAGAGCTACTTACAGGAAGAAAGAATCTCGATAGCCGTCACCCCAAGGAAGAGAGGAATTTGGTGAAGTGGAGCAGGCCTTTCCTATCAGATAATCATCGTTTGTCAATGATCATGGATCCTCAGCTCAAAGGTCGATTTCCTTCTAAAGCTGCAAGAACCATAGCTAACATTGCACAAAGGTGCCTTCAAATGGAGCCATCAGAAAGACCAACCATGGGAACCGTCGTTGAAATTCTAAAAAAGATACAAGATTTGAAGCATTCTTCTAAATTCCCATTGCAAGAACCAGCACAAACCTCTACAAAACAAATGTCAAGATCACCAAGTCTCGACGCTATCATCCACCCTGCATCAAGATCAAGTTTCTCTCCTTCACCATCAGCCAGAGCCCTGGTATCTGTTTCGCCTCCAAGATGGTCGGGAGTGCCGATTCAACTTCCGCATCACGCCTTTTCTTCTACCCTATATTTGGAGGAGCTTGACAGGCAAGAAAGCCGCAAGTCATTAACCTCAGCCTCTAGAAAGGCTAGTGTTGTTGAAGGATTTTGA 1641 0.4412 MGCFPILKRKKKKSDQIVYVKRVSPGEDSPTVLPEPQTHTRSLQSAPPSFKIRVKPIQTSVRVNNNRIRALSAPSSLDEADQDALVSIEYEEEEPKYRAASVKEQRSPSPQPLPLPSPKGGGTLKAIGSFKLGTASGPLYASGPLPLPPTGSLRNFSYDELAAACHNFSSDRYMSESLSSTIYKASFGDDASSSKKFEATVTRLRPSNQGLKEFINEVNTLASLRHPNLCRVLGFHARDGSEHRMLVYEKLHHGSLDRLLYGRSDGPSIDWNTRMKIAICAALGLSFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCVGHVPKEEISSSSSAVGNLSMETLEKGLLTPKSNVWSFGIFLLELLTGRKNLDSRHPKEERNLVKWSRPFLSDNHRLSMIMDPQLKGRFPSKAARTIANIAQRCLQMEPSERPTMGTVVEILKKIQDLKHSSKFPLQEPAQTSTKQMSRSPSLDAIIHPASRSSFSPSPSARALVSVSPPRWSGVPIQLPHHAFSSTLYLEELDRQESRKSLTSASRKASVVEGF 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00764 546 Pfam Protein tyrosine and serine/threonine kinase 182 443 IPR001245 GO:0004672|GO:0006468
Vivi5g00764 546 Gene3D Transferase(Phosphotransferase) domain 1 251 470 - -
Vivi5g00764 546 ProSiteProfiles Protein kinase domain profile. 168 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g00764 546 MobiDBLite consensus disorder prediction 456 472 - -
Vivi5g00764 546 MobiDBLite consensus disorder prediction 96 121 - -
Vivi5g00764 546 PANTHER OS01G0588500 PROTEIN-RELATED 106 447 - -
Vivi5g00764 546 Gene3D Phosphorylase Kinase; domain 1 149 249 - -
Vivi5g00764 546 MobiDBLite consensus disorder prediction 31 45 - -
Vivi5g00764 546 MobiDBLite consensus disorder prediction 453 472 - -
Vivi5g00764 546 MobiDBLite consensus disorder prediction 25 45 - -
Vivi5g00764 546 SUPERFAMILY Protein kinase-like (PK-like) 146 452 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00764 Vivi-Chr5 14475339 14479791 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00764 147 447 Receptor kinase-like Gene Family AT4G02010 37.785 2.18e-56 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Vivi5g00764 PK_Tyr_Ser-Thr 2.2e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00764 - - tpra:123923511 915.99