Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00725 ATGATATTAAAGAAAGCGGTGTATCCTTTGCAAGTGAAAGAAGTAGGTGATAATGGAATTTTGAGGACAGTGATGTTAAGAAGAACCAAGGACACAAAGGATAAAGAAGGAAGGCTTATACTTGTCCTGCCTCCAACTGATATTCAATTGATTGAGTGTGAACAGTCAGAATCTGAACGGGACTTCTACGATGCTCTCTTCTTGAGATCTAAAGGTGGAGAGGAAGCAGATTGTGATGAAGATATGGAAGAAGCCTGTGATGATCATGAAGATGTGGAAGAAGTTTGTGCTGAAGATGTTGAAGAAGATGTGGAAGAAGAGCAAGGAGAAGATCAATAA 339 0.3953 MILKKAVYPLQVKEVGDNGILRTVMLRRTKDTKDKEGRLILVLPPTDIQLIECEQSESERDFYDALFLRSKGGEEADCDEDMEEACDDHEDVEEVCAEDVEEDVEEEQGEDQ 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00725 112 PANTHER TRANSCRIPTION TERMINATION FACTOR 2-RELATED 19 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00725 Vivi-Chr5 13957551 13961241 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00725 19 71 RAD5 or RAD16-like Gene Family AT5G43530 77.358 1.94e-22 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00725 K15505 - vvo:131601356 146.362