Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00649 ATGGGAATAGATTATGATGGTTCAAAGTCTGCTGATTCTGATATATTTGTTGCTTATGGTTTAGAAAAGTATGTTGCAGCGGTTGTTCATGCTGTGAAGGATGTATGTAATTGTCGGAACGTGAAGCACCCTGTGATTTGCAGCGAGAGTGGTAGGGACATTATGTCTTATCATTCAATTTTGATTTTTGAGGCTATTGGTGCAAGTACAAACACTGCTCCTTCATTGTCCTCAATTGGATTGCAGTATTTAGCAACAGGACTTTCGGAACAAGCACTTAGAGGGTATCTCCAACACCGTGGTCAAGAAGGCGCAGGAATCGTCACCGTGAATAACAACCTCCTTCAATCCATCATCGGCGTTGGTCTTGTTTCCGACGTCTTCAACGAATCTAAGCTCGATCAGTTACCCGGAAGCTTAGCGATTGGTCATGTTCGTTATTCCACTGCTGGACAATACATGCTGAAAAACATTCAACCTTTCGTTGTTGGGTACCATTTTGGTTCTGTTGGGGTTGCCCATAATGGTAATTTGGTTAACTATCGCACTTTGAGAGCTAAGCTGGAAGAAACAGGTTCAATTTTTAACAATACTTATGATACTGAAATTGTTCTTCATTTGATTTCTACTTCAAAACATAGACCTTTTATATTGAGAACTGTTGATGCATGTGAGAAGTTTGAAGGGACTTATTCTGTTGTGTTTGTTACTGAGGATAAGCTTGTTGCTGTGAGAGATCCTTTCGGGTTTCGACCTATGGTTATGGGGAGGATAAGTAATGGTGCTGTTGTTTTTGCTTCTGAGACGTGTGCTCTTGATTTGTTTGAAGCTCATTATGAGAGGAAAGTATTCCCTGGTGAGGTTGTTGTGGTTGACGATAACGGGATTCAATCGTTTTGTCTCATGTCTCATCCGCAGCCGAAGCAATGTATTTTCGAGCATAATTACTTTGCTTTGCCTAATTCTGTTGATTTTAAAGGGAAACCTGTACTCAAGCAGAATATAGGCAATTGGAAAGCTTGTCTATTTATCTTAGGCAACGAGTGCGGCGAACGGTTAGCATACTATGGCATTGCAAAAAATATTGTTACTTATCTCACCCGCAAATTACATCAAGGAAATGTATCTGCTGCAAGAAATGTCACCACTTGGAAAGGCACTTGTTATCTTTCACCACTCATTGGAGCTGTTCTAGTTGATTCTTACTGGGGGGCAATACTGGACTATTGTTGTTTTTTTCTGCTATTTATTTCATTGGGATGTATACATTAA 1272 0.4009 MGIDYDGSKSADSDIFVAYGLEKYVAAVVHAVKDVCNCRNVKHPVICSESGRDIMSYHSILIFEAIGASTNTAPSLSSIGLQYLATGLSEQALRGYLQHRGQEGAGIVTVNNNLLQSIIGVGLVSDVFNESKLDQLPGSLAIGHVRYSTAGQYMLKNIQPFVVGYHFGSVGVAHNGNLVNYRTLRAKLEETGSIFNNTYDTEIVLHLISTSKHRPFILRTVDACEKFEGTYSVVFVTEDKLVAVRDPFGFRPMVMGRISNGAVVFASETCALDLFEAHYERKVFPGEVVVVDDNGIQSFCLMSHPQPKQCIFEHNYFALPNSVDFKGKPVLKQNIGNWKACLFILGNECGERLAYYGIAKNIVTYLTRKLHQGNVSAARNVTTWKGTCYLSPLIGAVLVDSYWGAILDYCCFFLLFISLGCIH 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00649 423 Gene3D MFS general substrate transporter like domains 335 422 IPR036259 -
Vivi5g00649 423 CDD GPATase_N 97 323 IPR035584 -
Vivi5g00649 423 Gene3D Lyase, Ornithine Decarboxylase; Chain A, domain 1 59 72 IPR009006 GO:0003824
Vivi5g00649 423 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 89 330 - -
Vivi5g00649 423 Pfam Glutamine amidotransferase domain 156 272 IPR017932 -
Vivi5g00649 423 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 96 299 IPR029055 -
Vivi5g00649 423 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 47 294 IPR017932 -
Vivi5g00649 423 Gene3D Alanine racemase 1 58 IPR029066 -
Vivi5g00649 423 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 85 334 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00649 Vivi-Chr5 12238803 12240074 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00649 97 325 PRT Gene Family AT4G34740 76.522 1.10e-124 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00649 K00764 - gmx:100791919 403.29