Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00608 ATGGAAAGACATCAATTCCAACACAAAAACCAAAGACAACAACAACAACATCAACAAAATCTTCATCTTATCAATAACACTGCTAACGTTTTTGATGTTTCTGATAGGTTTCCTCAATGGAGCATCCAAGAAACCAAAGAGTTTCTTATGATAAGATCAGAGCTAGATCAAACTTTCATGGAGACTAAAAGGAACAAACAGTTGTGGGATGTTATTTCTAACCATATGAAGGAAAAGGGTTATCATAGAAGTGCAGAACAGTGCAAGTGCAAGTGGAAAAACCTTGTTACTCGCTATAAGGGATGTGAAACAATGGAGACAGAAATGTTGAAACAGCAATTTCCATTTTACAATGAACTTCAAGCAATTTTCACAGCAAGAATGCAGAGAATGCTATGGGCTGAATCCAAAGACGGATCGACGAAGAAAAACGCGACGCAGCTTTCAACCGACGACGAGGAAGACGATGGCAACGAAGAAAGTGAAGAAATATCTCAAAAGGGTAGAAGTACTAGAAGTAGAAAGAACAAAAAAGCAAAGATAGTTAGCGAAAGCGGTAACGGTAGCAGCAGGAGTTTCCACCAGAATTTAAAGGAGATTCTGGATGAGTTCATGAGGCAACAAGTTCAAGTTGAAGCACAATGGATGGAAGCATTTGAAGCTAGAGAGAATGAGAGGAGGTTGAGGGAGATGGAATGGAGACAACAAATGGAAATGTTGGAGAATGAGAGATTGTTGATGGAACAAAGATGGAGAGAAAGGGAAGAAGAAAGGAGGATTAGAGAAGAAGCTAGGGCTGACAAAAGGGATGCATTAATCATAGCATTGTTAAATAAGTTAGAAAGAGAATAG 852 0.3885 MERHQFQHKNQRQQQQHQQNLHLINNTANVFDVSDRFPQWSIQETKEFLMIRSELDQTFMETKRNKQLWDVISNHMKEKGYHRSAEQCKCKWKNLVTRYKGCETMETEMLKQQFPFYNELQAIFTARMQRMLWAESKDGSTKKNATQLSTDDEEDDGNEESEEISQKGRSTRSRKNKKAKIVSESGNGSSRSFHQNLKEILDEFMRQQVQVEAQWMEAFEARENERRLREMEWRQQMEMLENERLLMEQRWREREEERRIREEARADKRDALIIALLNKLERE 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00608 283 CDD GT1 38 103 - -
Vivi5g00608 283 MobiDBLite consensus disorder prediction 136 193 - -
Vivi5g00608 283 ProSiteProfiles Myb-like domain profile. 40 96 IPR001005 -
Vivi5g00608 283 Coils Coil 194 214 - -
Vivi5g00608 283 Coils Coil 230 250 - -
Vivi5g00608 283 FunFam Zinc finger and SCAN domain-containing 20 40 101 - -
Vivi5g00608 283 PANTHER FI21293P1 12 281 - -
Vivi5g00608 283 Gene3D - 40 101 - -
Vivi5g00608 283 Pfam Myb/SANT-like DNA-binding domain 39 123 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00608 Vivi-Chr5 11117455 11118901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00608 17 283 Trihelix Transcription Factor Family AT2G38250 54.380 2.31e-71 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vivi5g00608 Myb_DNA-bind_4 4.1e-20 CL0123