Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00551 ATGCCTTCATCTTCCACAACCACAGTTTCAAAATGCATTATCTACCCAAGCCAAAAATCATCAATAAAACCCTTAAAACTTTCTGTTTCTGATCTTCCCATGCTCTCATGCCACTACATCCAAAAGGGTATTCTACTTTCCGCACCTCCTTATTCCTCTGAAAACCTAATCCACACCCTCAAAAACTCCCTCTCCATCACTCTCTCCCACTTCCCTCCCCTCGCCGGCAGACTCACCACCGACTCCGACGGTTACATTTACATAACCTCCAACGACGCCGGCGTCGAGTTCGTTCACGCAAAAGCCAAACACCTTACGATAAACACCATTATCTCACCTTCTCTCATAGACGTTCATCCTTGTTTCCAAGAGTTTTTCGCTTACGATTTACCGGTTTCTTACTCCGGACACAATATCCCCCTCGCCGCCGTCCAAGTCACCGAACTCGCCGACGGTGTTTTCATCGGTTGCACTGTTAACCATTCCGTAACCGACGGAACTTCCTTCTGGCACTTCTTCAACACGTTCGCCGCCGTCACGAAAAACACCACCGCCGCTGTTAAGATCTCCAAATCCCCCGATTTCACCCGCGACACAGTTTTCAACTCCCCCGCCGTCCTCCCTATCCCCGCCGGTGGCCCCGCCGTCACGTTTGACGTCAACGAGCCCATCCGTGAACGCATCTTCCATTTCTCTCGTGAATCCATTCTCAAACTCAAACACAAAGTAAACAGTAACAGTAACAGTAACGGTTTAACAGATCCAACTGAATTGATAGGGAAACAAGCAAACGACGGTTGGAAAAACGTTTACTCTAACGGTCACGTTAACGGAAACGCAACCGTTAACGGAAACGGAAAAACAAACTACAGAAACGAGATCTCGTCGTTTCAATCGTTAAGTGCGCAACTATGGAGATCAGTGACACGTGCGCGAAATTTAGATTTATCGAAAACGTCGACGTTTCGTATGGCTGTGAATTGTCGACACAGACTAAACCCAAAAATGGACGCGTTTTATTTCGGAAACGCGATTCAGAGCATCCCAACCGTTGCTTCGGTGAAAGATATAATATCCAACGATCTAAAATTCTGCGCGGAGCTTCTACACAAAAACGTCGTCGTTTACGATGACGCTACGGTGCGGAGCGGAATAGAGGATTGGGAGAGTAATCCTAGGTTGTTTCCGTTGGGGAATTTCGATGGAGCTATGATAACTATGGGAAGTTCACCTCGTTTTCCTATGTATGATAATGATTTTGGTTGGGGGAAGCCTTTGGCAATTCGGAGTGGAAAGACGAATAAATTTGATGGGAAAATTTCAGCTTTTCCTGGGAGAGATGGAAATGGAAGTGTTGATCTTGAGGTTGTTTTGGCTCCTAAGACTATGGATGGACTTGAAAACGACATGGAGTTTATGCAGTATGTTACAGAAGTAGAAGTAGTAGTGTGA 1452 0.4621 MPSSSTTTVSKCIIYPSQKSSIKPLKLSVSDLPMLSCHYIQKGILLSAPPYSSENLIHTLKNSLSITLSHFPPLAGRLTTDSDGYIYITSNDAGVEFVHAKAKHLTINTIISPSLIDVHPCFQEFFAYDLPVSYSGHNIPLAAVQVTELADGVFIGCTVNHSVTDGTSFWHFFNTFAAVTKNTTAAVKISKSPDFTRDTVFNSPAVLPIPAGGPAVTFDVNEPIRERIFHFSRESILKLKHKVNSNSNSNGLTDPTELIGKQANDGWKNVYSNGHVNGNATVNGNGKTNYRNEISSFQSLSAQLWRSVTRARNLDLSKTSTFRMAVNCRHRLNPKMDAFYFGNAIQSIPTVASVKDIISNDLKFCAELLHKNVVVYDDATVRSGIEDWESNPRLFPLGNFDGAMITMGSSPRFPMYDNDFGWGKPLAIRSGKTNKFDGKISAFPGRDGNGSVDLEVVLAPKTMDGLENDMEFMQYVTEVEVVV 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00551 483 Gene3D - 222 473 IPR023213 -
Vivi5g00551 483 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 474 - -
Vivi5g00551 483 Gene3D - 7 207 IPR023213 -
Vivi5g00551 483 Pfam Transferase family 7 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00551 Vivi-Chr5 9052587 9054625 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00551 58 468 Monolignol Biosynthesis Gene Families AT5G48930 26.179 2.50e-32 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00551 - - cam:101493121 794.267